Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2389 ATGGATCTTCAGACAAATTTTTTTCAAGAAAATTACTACTTGAAACCCAACATGAAAAATTATGAGAATCCTTTTGGAGTGGTTCCTTCATCTCATGGATTCCTACAAGATTTTAATCACATTGATAAATTTAATGTGAATAGTACCTTTTCCAATACTGTTTCCGGGGTCCAAAATTTTTATCCTAGTGATAATTTTACCTATGATGTTCATCATAATTTCAAGCCTTTTGTGGAGAACAATAGTGGTAATGGTCATGCTTATGTTATGGATAATTTTCTATATGGAGGTTATGGCTTGAACAATAACCTTTCTCAAAGGAATAATCAAATGGAAATGATGGTTACAAACCAAAATTACTTTCCATTTAATATTCCTCAAGAAACCAAGCCTTTGAATACCATTGTACCAGATGAAGTTTCATGCATATCATCAGTGAATTATTACAGAAGAGTTGACATGAACAGAAACAATAAGGCATATCCTTATGCCTCTAGAAAGAAGGAAAAAGTTCGTAGGAAGTGCAATTTTGTAAAAGGACAATGGACAGCAGAAGAAGATGGGTTGTTGGTTCAGCTGGTTGGACAACATGGATTGAGGAAATGGTCTCATATTGCTGAGATGTTGCCTGGTAGAATAGGAAAACAATGCAGAGAGAGATGGCATAATCATCTAAAGCCTGATATTAAGAAGGACATATGGAGTGAGGAAGAGGATAACATATTGATCAAAGCACATGGAGAGATAGGAAACAAATGGGCAGAGATAGCTAAAAGATTACCAGGAAGAACTGAAAACTCAATCAAAAACCATTGGAATGCAACAAAGAGAAGACAATACTCCAAAAGAAAGGGTAGATCAAAGTACCCTAAAGGAACTCTTTTACAAAAATATATCAAGAGCTTGAACCTAGACGAAAACCCTCCAAAAGATTATAGGAGAAAAAACAGAACCAACAAAACCACAGTACTATCAGCTCAGTCTCAGAAAGAAGAACAATTTTGTCCAAGTGATCAGTGTTTGGTACCAAGTTGTGATTTTGATGATGTCGCGGATTTTTGTTTCGATGAGAATTTGTTTAAAGATGGGTGTAGTATTGATTCGTTGTTAGACGATATGCAACGCGCTGATCAATTTATGGATGGGAAAAAACATTGTGATGTTGAGAGAGAGATGCCACTAGATAGTATGGAATCATTGCTTGGAGTTGAAGTTAAGAAGGAGATGGATTTGATGGAGATGGTTTTTTCAGTTTTTCATAGATTGTATACAATTGTTATAAATTCGACGGTTGGTAGAAGAGAAAGGTGCACGATTTTTCAGACCAAATTGAAGAGTGCACTCGTGCTATATGTGTGTGCGCGCGCGCACGCACATGTGTGTTTTGTGTGTGATATTAACATTACATTTACTTTTTATACAAAAAAAAAAAGTACGCCTAGTTAG 1446 0.3555 MDLQTNFFQENYYLKPNMKNYENPFGVVPSSHGFLQDFNHIDKFNVNSTFSNTVSGVQNFYPSDNFTYDVHHNFKPFVENNSGNGHAYVMDNFLYGGYGLNNNLSQRNNQMEMMVTNQNYFPFNIPQETKPLNTIVPDEVSCISSVNYYRRVDMNRNNKAYPYASRKKEKVRRKCNFVKGQWTAEEDGLLVQLVGQHGLRKWSHIAEMLPGRIGKQCRERWHNHLKPDIKKDIWSEEEDNILIKAHGEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKGRSKYPKGTLLQKYIKSLNLDENPPKDYRRKNRTNKTTVLSAQSQKEEQFCPSDQCLVPSCDFDDVADFCFDENLFKDGCSIDSLLDDMQRADQFMDGKKHCDVEREMPLDSMESLLGVEVKKEMDLMEMVFSVFHRLYTIVINSTVGRRERCTIFQTKLKSALVLYVCARAHAHVCFVCDINITFTFYTKKKSTPS* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2389 481 CDD SANT 182 225 IPR001005 -
Mal2g2389 481 SUPERFAMILY Homeodomain-like 177 272 IPR009057 -
Mal2g2389 481 ProSiteProfiles Myb-like domain profile. 226 276 IPR001005 -
Mal2g2389 481 Pfam Myb-like DNA-binding domain 179 225 IPR001005 -
Mal2g2389 481 Pfam Myb-like DNA-binding domain 234 273 IPR001005 -
Mal2g2389 481 SMART sant 230 278 IPR001005 -
Mal2g2389 481 SMART sant 178 227 IPR001005 -
Mal2g2389 481 CDD SANT 234 276 IPR001005 -
Mal2g2389 481 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 230 280 IPR017930 -
Mal2g2389 481 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 174 229 IPR017930 -
Mal2g2389 481 Gene3D - 233 301 - -
Mal2g2389 481 Gene3D - 178 231 - -
Mal2g2389 481 PANTHER BNAC03G62830D PROTEIN 87 370 - -
Mal2g2389 481 PANTHER MYB PROTEIN-RELATED 87 370 - -
Mal2g2389 481 ProSiteProfiles Myb-like domain profile. 174 225 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2389 Mal-Chr2 29927191 29931558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2389 71 377 MYB Transcription Factor Family AT4G18770 50.926 3.27e-94 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal2g2389 Myb_DNA-binding 9.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2389 K09422 - gmx:102662267 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4104 5 111425144 111427033 Mal2g2389 2 29927191 29931558 ECH
Mal2g2389 2 29927191 29931558 Mal2g2389 2 29927191 29931558 ECH
Mal2g2389 2 29927191 29931558 Mal5g4104 5 111425144 111427033 PCT