Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2378 ATGAGATCAAACAAAGGTGGTGATGCAGAGGGCATCGCCGCTCTTCGCACCACAGTGAATATTGACTACATCGGAGCAAAGAAGGAGAAAATAGTTATCCCCTCTACATTGCCTTTCAGTACATTCTTAGGTGATGCAATGGATAAACCTATTATTACTGGGAATGATATATCACATACCATTGGAAGTGATGGGAAGCAATTGGGGACATATAATAGTGCAACTGTGGCTATGAATTCTGACTATTTCATGGCAATCAACATGAAATTTCAGGGTATTGATCCAAAATTGAGGGAAGCTGGAAGCAAGAAAGAAACACTCCATGTTAGTCAAAGGGGTGCGGCTCAGTTCAAGACATTTTCGGAAGCACTCCACAACATTCTGCAACCGAAAATCAGGAAGATTACAATTTCCATAGGCTCAGGAGTTTACAGTACATTCTTAGGGGATGCAATGGATAAACCTATTATTACTAGGATTGATATATCACATGCCATTGGAAGTGATGGGAAGCAATTGGGGACATATAGTAGTGCAACTGTGGCTATGAATTCTGACTATTTCATGGCAATCATCATGAAATTTCAGGGCAAAACACTTTTCTGGAATTGA 612 0.402 MRSNKGGDAEGIAALRTTVNIDYIGAKKEKIVIPSTLPFSTFLGDAMDKPIITGNDISHTIGSDGKQLGTYNSATVAMNSDYFMAINMKFQGIDPKLREAGSKKETLHVSQRGAAQFKTFSEALHNILQPKIRKITISIGSGVYSTFLGDAMDKPIITRIDISHAIGSDGKQLGTYSSATVAMNSDYFMAIIMKFQGKTLFWN* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2378 203 Pfam Pectinesterase 25 91 IPR000070 GO:0030599|GO:0042545
Mal2g2378 203 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 94 197 - -
Mal2g2378 203 PANTHER PECTINESTERASE 94 197 - -
Mal2g2378 203 SUPERFAMILY Pectin lyase-like 28 92 IPR011050 -
Mal2g2378 203 Gene3D - 22 104 IPR012334 -
Mal2g2378 203 Gene3D - 105 201 IPR012334 -
Mal2g2378 203 SUPERFAMILY Pectin lyase-like 105 198 IPR011050 -
Mal2g2378 203 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 25 105 - -
Mal2g2378 203 PANTHER PECTINESTERASE 25 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2378 Mal-Chr2 29624882 29628668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2378 25 95 Carbohydrate Esterase AT5G47500 38.028 5.29e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2378 K01051 - qsu:112011696 90.8929