Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2364 ATGACTCCTAAAACCATTCCAACACCAACCCATCGACATCCCCTATCCTTCCCAGCAGTCCACCCCTGCAAATCCATATCTCCTGCAACCCTCTTAACTTCCCTAATCACTCTCTCACAAAACATATGCACTTTTCAACCAAATTCCTTCCCAACTCAAAAACAAAACGCCAGAGAAACAAAACGCCAAATCCAAATTCTTCTCATATTCTTCCAAGAGCTTCAATCCCGTAACTCTTTCATCCCGAAACCAGTCATTTCCATCTTCTCGGAGCTTCACTTCACCCTCCAGAAAATCTACTTCTTATTCCAAGACTGTTCAATCCAAGGCGCGCGACTCTGGTTGCTCGTTAAATATCAATTTGTTGCCACACAGTTTCATCTTCTCATCTTCTCCGTCTCAAAATCTCTTGACGTGTTACCCCTTAACCTCATCGATGTATGCGATGAGGTTAAAGAGGTAATTCAGTTACTAACAAAACAAGCTAGAAATATCCAGCTGGAACTTGATCATAATGATGAATACACAGCCAAACGTGTCGCTTCAATTTTGAATCAATTCGAAAAAGGAATCGAACCTGACTTCGATTCTATTAAACAAGTACTTGATTCCCTTGAAATCAAAACTTGGATTAATTGTAACAACGAAATCAAATTCCTCCAAGACGAAGAAGAACGAGAGAAACATCAAAATCAAGAGAAAGAGGTTCATTTGTTGAGTGGTTTAATAGGTTTTTTATGCTACTGTCGTGTGGTAATATTCGAAACTCTAGATTTTCATTTGCTAAACGGTAACAAAACCGAAATCAAGTGCGCTGTAGAGATGTTAAACTGCATAACACCAGATGATTATCGTTGTCCAATTTCTCTGGAACTAATGACAGATCCTGTAACAGTTTCAACTGGCCAAACATACAATAGAGCTTCAATTCAAAAATGGTTTAAAGCAGGAAACATGACATGTCCGAAAACAGGGGAAAGACTCATTTCCACTGAGCTTTTTCCCAACACAGCACTCAAAACACTTATCCAACAATTCTGTTATGATAACAGAATTTCAATTTTAACAACCAAATCACACATTAACGTAGCAGCAACCACGGTTAATCCAGGTAGTCCAGCTGCAGCACACGCGATACACTTTGCGTCGTGGTCACTTGCTCAGAGACTAGTTTTCGGTACAGATGAACAGAAAAACAAAGCAGCTTATGAGGTTAGATTATTAGCAAAATCAAATGTTTTCAACACGGCGTGTTTGGTTGAGATTGGAACTGTGCCACCGTTGCTTGATCTTGTTTTAACTTCAGCAACGCAAGAGAATGCAATTGCTGCTCTTTTGAAGCTTTCAAAGCATAGTAATGGCCGCGAAGTTATCATGGAGAGTAGAGGTTTAGCACCAATTGTTAAAGTTCTCAAAAGAGGATATAGTTTAGAAGCTCGTCGAGTTGCAGCTGGTATAATATTTTACCTCACTTCGGTGAAAGAGTACAGAAAATTGATAGGTGAAAATTCAGAAGCAGTTTCTGGTTTAGTTGAATTGATAAAGAAAGGAACAGTTCGAGGAAAAAAGAACGCGGTGCTTGCAATTTTCGGGTTGTTATTGCTTCATAAGAATCATTCTAAGGTGCTTAATTCTGGTGTTGTTCCCGCTATTGTTAAGGTTTTAGGTTCTTCTGATAAAGGTTATGTTGTTCATGATTGTTTAGCGGTTTTGGTAGCATTGGCGGAGAATGTGGAAGGTGCTCGTGCTGTATTAGAATGCTCGGGTTTGTCTTTGGTTGTTGGGATTTTGCAATCTGCAAATTCGCGTGCAGAGAAGGAGTATTGTGTTTCCATTTTGGTTTCACTCTGTGTTAATGTTGGTGGCGAGGTTGTCAGTGTTCTGGCAAACGATGCTTCGGTGATTATGCCTTTGCTTTACGCAATTCTTACTGATGGTACTCCACAGGCGGAAAAGAAAGCGCGGAAACTTATTAATGTCTTGCAAGAATTCGATGAGAAGAGGACTTTGGGGATGATGGATTCTTCTGTTATGCAGCAAAGATTTCTTCAGTTGAATTAG 2061 0.3979 MTPKTIPTPTHRHPLSFPAVHPCKSISPATLLTSLITLSQNICTFQPNSFPTQKQNARETKRQIQILLIFFQELQSRNSFIPKPVISIFSELHFTLQKIYFLFQDCSIQGARLWLLVKYQFVATQFHLLIFSVSKSLDVLPLNLIDVCDEVKEVIQLLTKQARNIQLELDHNDEYTAKRVASILNQFEKGIEPDFDSIKQVLDSLEIKTWINCNNEIKFLQDEEEREKHQNQEKEVHLLSGLIGFLCYCRVVIFETLDFHLLNGNKTEIKCAVEMLNCITPDDYRCPISLELMTDPVTVSTGQTYNRASIQKWFKAGNMTCPKTGERLISTELFPNTALKTLIQQFCYDNRISILTTKSHINVAATTVNPGSPAAAHAIHFASWSLAQRLVFGTDEQKNKAAYEVRLLAKSNVFNTACLVEIGTVPPLLDLVLTSATQENAIAALLKLSKHSNGREVIMESRGLAPIVKVLKRGYSLEARRVAAGIIFYLTSVKEYRKLIGENSEAVSGLVELIKKGTVRGKKNAVLAIFGLLLLHKNHSKVLNSGVVPAIVKVLGSSDKGYVVHDCLAVLVALAENVEGARAVLECSGLSLVVGILQSANSRAEKEYCVSILVSLCVNVGGEVVSVLANDASVIMPLLYAILTDGTPQAEKKARKLINVLQEFDEKRTLGMMDSSVMQQRFLQLN* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2364 686 ProSiteProfiles U-box domain profile. 279 353 IPR003613 GO:0004842|GO:0016567
Mal2g2364 686 PANTHER U BOX DOMAIN-CONTAINING 10 670 - -
Mal2g2364 686 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 423 463 IPR000225 GO:0005515
Mal2g2364 686 SMART Ubox_2 283 346 IPR003613 GO:0004842|GO:0016567
Mal2g2364 686 Pfam U-box domain 281 351 IPR003613 GO:0004842|GO:0016567
Mal2g2364 686 PANTHER OS07G0532750 PROTEIN 10 670 - -
Mal2g2364 686 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 546 589 IPR000225 GO:0005515
Mal2g2364 686 SUPERFAMILY ARM repeat 393 661 IPR016024 -
Mal2g2364 686 SUPERFAMILY RING/U-box 280 353 - -
Mal2g2364 686 Coils Coil 148 168 - -
Mal2g2364 686 CDD RING-Ubox_PUB 284 326 IPR045210 -
Mal2g2364 686 Gene3D - 379 679 IPR011989 -
Mal2g2364 686 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 280 353 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2364 Mal-Chr2 29478644 29480704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2364 8 684 U-box Gene Family AT1G10560 39.398 1.36e-152 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2364 - - gmx:100810963 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4123 5 111618257 111620329 Mal2g2364 2 29478644 29480704 ECH
Mal2g2364 2 29478644 29480704 Mal2g2364 2 29478644 29480704 ECH