LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g2358	ATGGGATCATACATTAATTTGGTAGACTTGGTGTCGGCGGATAATATCAATTTCCATCGAACTCCTCCGCGAGCTATGACTGTTCCAGGAGTTATGTTGACTGATTTAGATGGTCGACAGAGCAATGATGATGATTCAAATGCTTTCTCGTCAGAAGACATACATCGCCAGATGATAATAGTAGCAAATTTTCTTCCTCTAAATGCTAAAAAGGATGACATTTCTGGTAAATGGTGCTTTAGTTATGACGAAGATTCAATTTTTTGGCAGTTAAAGGATGGTCTCTCTTCTGATAAAAATGTTCTTTACGTGGGATCTCTGAAGGTTGATGTCGATGAAAGTGAGCAACAAAATGTTTCCCAATTGTTGGAGGAATTCAATTGCTTCCCTACTTTTATTCCTTCAGAAATCCAGAAAAAGTTTTATGATGGATTCTGCAAGAACTATTTGTGGCCTCTATTTCATTACATGCTGCCTATGTATCAAGGTTACTGCAATGACTTCGATGAGTCACTTTGGCAGGCTTATGTTTCTGCTAACAAGATATTTGCTGATAAAGTCCTGGAAGTCCTTAATTCAACAGATGATTATGTATGGATTCACGATTATCATCTTATGGTTCTTCCAAAATTTCTACGGAAGCGGTTTCGACGTGTCAGGCTAGGCTTTTTCCTCCATAGTCTGTTTCCTTCCTCCAAAAGTTATAGATATATACCTATCGGAACTGAAATTTTGAAAGCTCTGCTTAATGTAGATATGATTGGCTTTCAAACATTTGATTACGCTCACAATTTTCTGTCCGCCTGCAGTCGAAAACTTGGCCTGGAATTTGAATCCAAAAGGGGTCACATTTGGATTGAATATTTTGGACGTTCGATATTCATTAAAATATTGCCAGCTGGAATTCATATCGGTCGCATTCAATCCGTTTTAAATCACTCTTCCGCTTCAATTAAAGTTAGAGAAATCTACAAACAACTTAGGGGGCTAAAACTTATTGTCGGTGTAGACGACATGGACATATTCAAAGGCGTGAGCTTGAAGTTTGCTGCCTTTGAACAACTCTTGAAACAATTCCCTGAACTACAGGGTCAGGTTGTATTAGTCCAAATTTTAAATCCTCCAAGGAGTGATGGTAGATATGTTGAAGTAGCGAAGGAGGAGGCCTACGCGATTTCAAAACGGATAAATGAAAGGTTTGGTCTTCTAGGTTATAAACCTGTCGTCATCATTGATCGTTATGTTCCTTTCCATGAGAAGGCAGCGTATTATGCCTTGGCGGAATGTTGCATTGTGAATGCGGTGCAGGACGGTATGAATTTGGTTCCGTACAAGTACTTAGTTTGCAGGCAGGGGAGTCTTAAAATGGACAAAGCGTTAGATATTGCTTCTGACTCCCCTCGGATAAGTTCAATTGTTGTTTCTGAGTTTGTAGGTTGCTCGTCATCTCTTAGTGGGGCAATCAAGGTGAAACCGTGGGATAAAAATGCCGTTGCTGAAGCGTTAAAGTTGGCTATCACAATGTCCAATCAAGAGAAACAACGTCGGCATGAGAAGAACTACCAATATGTTAGTTCTCATGATGTGGCTTATTGGGCCCAACATTTTGAGCAAGACCTAGTTTTCTCATGTAAGGATCATAATGCGAAACTTTTCTGGGGTATTGGCTTTGGCCAGGATTTTAGAGTTTTGTCCCTCTCTCCTAATTTCAGGAAGCTGTCCAAAAACTACGTTGTTTCTGCATATAAAAGGACGAAATGCAGGGCAATCTTTTTAGATTATGATGGTACAATTGTACCTCAGGCTTCCATTATTCCATTCCCCGGTTCTGAAGTCGTAACTGTGCTAAACAATCTCTGCAGTGACCTTAACAACACTGTGTTTATTGTCAGTGGTCGGGATAGATCTACATTGAGCGCATTGTTTTATGAGTGTGAGAATCTTGGTATAGCAGCTGAGCATGGTTGTTATATATGTTGGGGCGAAGAATCAGATTGGAAAGCGAATCATGTCGGCACAAATTTTGCATGGAAAAGCATCACTGAACGTGTGATGCGATCATACACTGATCAAACAGATGGCTCGTATATAGAGTACAAAGACAGTGCATTGGTATGGAATTACCATGATGCTTCAACATATTTTGGATCGCTGCAAGCCGATGAGATGCTTTACGATCTACGAAGTGTGCTTGCCAAAGAGCCTGTTGTTGTTAAAAAGGGGAAGCATATTGTTGAGGTCAAGGTTCAGGGGATTGACAAAGGGTTAGCTGTAGACGAAGTTCTGTCATTACTAACAATGAGCGGCAAATCACCAGATTTTGTTCTTTGCATTGGGGATGATAGATCCGATGAGGACATGTTTGAGAGCATATTAAACAAATCCTATGCTTCAACCTCATCTTCATCGCCAGAAATTTTTGCATGTACTGTTGGGCAGAAACCAAGCAAAGCTAATTACTTCTTGGATGATAGTGTGGAAGTTATGATGTTACTTGAGGATCTTGGTTCAGCTGCTGCAGAGTCTTGA	2529	0.4021	MGSYINLVDLVSADNINFHRTPPRAMTVPGVMLTDLDGRQSNDDDSNAFSSEDIHRQMIIVANFLPLNAKKDDISGKWCFSYDEDSIFWQLKDGLSSDKNVLYVGSLKVDVDESEQQNVSQLLEEFNCFPTFIPSEIQKKFYDGFCKNYLWPLFHYMLPMYQGYCNDFDESLWQAYVSANKIFADKVLEVLNSTDDYVWIHDYHLMVLPKFLRKRFRRVRLGFFLHSLFPSSKSYRYIPIGTEILKALLNVDMIGFQTFDYAHNFLSACSRKLGLEFESKRGHIWIEYFGRSIFIKILPAGIHIGRIQSVLNHSSASIKVREIYKQLRGLKLIVGVDDMDIFKGVSLKFAAFEQLLKQFPELQGQVVLVQILNPPRSDGRYVEVAKEEAYAISKRINERFGLLGYKPVVIIDRYVPFHEKAAYYALAECCIVNAVQDGMNLVPYKYLVCRQGSLKMDKALDIASDSPRISSIVVSEFVGCSSSLSGAIKVKPWDKNAVAEALKLAITMSNQEKQRRHEKNYQYVSSHDVAYWAQHFEQDLVFSCKDHNAKLFWGIGFGQDFRVLSLSPNFRKLSKNYVVSAYKRTKCRAIFLDYDGTIVPQASIIPFPGSEVVTVLNNLCSDLNNTVFIVSGRDRSTLSALFYECENLGIAAEHGCYICWGEESDWKANHVGTNFAWKSITERVMRSYTDQTDGSYIEYKDSALVWNYHDASTYFGSLQADEMLYDLRSVLAKEPVVVKKGKHIVEVKVQGIDKGLAVDEVLSLLTMSGKSPDFVLCIGDDRSDEDMFESILNKSYASTSSSSPEIFACTVGQKPSKANYFLDDSVEVMMLLEDLGSAAAES*	843

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g2358	842	Pfam	Trehalose-phosphatase	591	825	IPR003337	GO:0003824\|GO:0005992
	Mal2g2358	842	TIGRFAM	T6PP: trehalose-phosphatase	587	834	IPR003337	GO:0003824\|GO:0005992
	Mal2g2358	842	Gene3D	Glycogen Phosphorylase B;	309	525	-	-
	Mal2g2358	842	PANTHER	ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED	3	839	-	-
	Mal2g2358	842	TIGRFAM	HAD-SF-IIB: HAD hydrolase, family IIB	589	790	IPR006379	-
	Mal2g2358	842	CDD	GT20_TPS	59	540	IPR001830	GO:0003824\|GO:0005992
	Mal2g2358	842	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	57	540	-	-
	Mal2g2358	842	CDD	HAD_TPP	589	830	-	-
	Mal2g2358	842	Gene3D	-	587	714	IPR023214	-
	Mal2g2358	842	Gene3D	-	716	842	IPR023214	-
	Mal2g2358	842	Pfam	Glycosyltransferase family 20	57	540	IPR001830	GO:0003824\|GO:0005992
	Mal2g2358	842	Gene3D	Glycogen Phosphorylase B;	48	308	-	-
	Mal2g2358	842	SUPERFAMILY	HAD-like	588	836	IPR036412	-
	Mal2g2358	842	PANTHER	TREHALOSE-6-PHOSPHATE SYNTHASE	3	839	IPR001830	GO:0003824\|GO:0005992

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g2358	Mal-Chr2	29426065	29429425	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g2358	3	842	Trehalose Biosynthesis Gene Families	AT1G23870	59.479	0.0	1051

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g2358	K16055		-	gmx:100812031	1179.85