Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2349 ATGGGTGGCAATGGCAAACATAGGTGGAAAATTTCCTTCCACCGTTCCTCCTCTCAATCTAAGCAACAACAACCTCCCAAAGAGTTTCTATGTCCTATTACCGGCTCATTAATGTCCGACCCGGTCGTAGTTTCTTCGGGTCAAACCTTTGAACGTCTCTCCGTCCAAGTCTGCAACGATTTAAATTTCACCCCAATCCTCCAAAACGGAACCCGACCCGATTTCTCAACAATCATCTCCAATTTAGCCATCAAAACAACAATCATAAACTGGTGCGATAAAACCCGCACCGTACACCCAACCGCACCGGATTACTCCACCGTGGAGAGTATTGTTAGAGAAAAAATTACAGCGGAGAAAGAGGATCCACTTAGGGTTTCTGAAAAGGAGCTGTTAAACGCGGTGGCGGAAAATCCACCGGTGATATTCTCACACGCCGCGACGGAGTTTAGTCCACGTGTCAACCACTTCAATTCGGGATCTTCGTCGGAGGAATCGGTGATAATCGCGGCGAGTCCTGGAACACCTTTACCTTTCACACTTCGTCCAACGTGTTTTTCACCTTCTTCATCTTCTTCGTTTGAGATCGAAGTTCAAAACCCTAACGTTCCTGTTTCGGAAGAAGAAGAAACTCTACTGAAGAAGCTCAAGAGTAAAGAGGTTTTTGAGCAAGAACAAGGTTTAGTTTCGCTTAGGAGTATCACGAGGAACAGAGAAGAAGCTAGGGTTTCGCTATGCACGCCGCGGATTTTATCGGCGTTGCGTTCCTTGATTGATTCTCGTTATGTTGTTGTTCAGGTCAACGCTGTTGCTTCGTTGGTCAACCTTTCACTTGAGAAATCGAACAAGATGAGAATTGTGCGGTCAGGATTTGTTCCTTTTCTGATTGATGTGTTGAAGGGGGGATTCAGTGAATCTCAGGAACACGCTGCGAGTGCATTGTTTAGTTTGGCTTTGGATGATGATAACAAGATGGCAATTGGTGTTCTTGGTGCTTTGCAGCCGTTGATGCACGCGTTGAGGTCGGAGTCTGAGCGAACGAGGCATGATTCAGCACTTGCGCTGTATCATTTGACACTTGTTCAGAGTAATAGAATTAAGATGGTGAAACTTGGGGTGGTTCCGACGTTGCTTTCGATGGTTATGACGGGGACAATGGCAAGTAGGGTGTTGTTGATTTTGTGTAATCTGGCAATGTGTGTGGAAGGAAGGACCTCAATGCTGGACGCGAATGCAGTGGAGGTTTTGGTGAGTTTGTTGAGGGGGAATGAGTTGGATTCGGAGGCGACAAGGGAAAATTGTGTGGCGGCGTTGTATGCATTGAGTCATGGGAGTTTGAGGTTTAAAGGGTTGGCAAAGGAAGCAAAAGCTGTGGAGGTTTTGAGGGGGATTGAGGAGACCGGGACGGAGAGGGCGAGGGAGAAGGCTAAAAGGGTGTTGGAGAAGATGAGGGGTTTTGGAGATGGTGATGATGAAGATAGTTCTGAGTTCGATAGTCTTTTTGAATCGGGTGGGTTGACTCGATCGAGGTACCGAGCTGCTGGAGCTAGGAACAATAACCTTGTCAACTCAACTACATTTTAG 1584 0.4678 MGGNGKHRWKISFHRSSSQSKQQQPPKEFLCPITGSLMSDPVVVSSGQTFERLSVQVCNDLNFTPILQNGTRPDFSTIISNLAIKTTIINWCDKTRTVHPTAPDYSTVESIVREKITAEKEDPLRVSEKELLNAVAENPPVIFSHAATEFSPRVNHFNSGSSSEESVIIAASPGTPLPFTLRPTCFSPSSSSSFEIEVQNPNVPVSEEEETLLKKLKSKEVFEQEQGLVSLRSITRNREEARVSLCTPRILSALRSLIDSRYVVVQVNAVASLVNLSLEKSNKMRIVRSGFVPFLIDVLKGGFSESQEHAASALFSLALDDDNKMAIGVLGALQPLMHALRSESERTRHDSALALYHLTLVQSNRIKMVKLGVVPTLLSMVMTGTMASRVLLILCNLAMCVEGRTSMLDANAVEVLVSLLRGNELDSEATRENCVAALYALSHGSLRFKGLAKEAKAVEVLRGIEETGTERAREKAKRVLEKMRGFGDGDDEDSSEFDSLFESGGLTRSRYRAAGARNNNLVNSTTF* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2349 527 PANTHER U BOX DOMAIN-CONTAINING 1 517 - -
Mal2g2349 527 MobiDBLite consensus disorder prediction 1 28 - -
Mal2g2349 527 Gene3D - 206 485 IPR011989 -
Mal2g2349 527 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 38 1 517 - -
Mal2g2349 527 SUPERFAMILY RING/U-box 11 98 - -
Mal2g2349 527 CDD RING-Ubox 30 77 - -
Mal2g2349 527 Pfam Armadillo/beta-catenin-like repeat 320 359 IPR000225 GO:0005515
Mal2g2349 527 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 102 IPR013083 -
Mal2g2349 527 ProSiteProfiles U-box domain profile. 24 98 IPR003613 GO:0004842|GO:0016567
Mal2g2349 527 SMART Ubox_2 28 91 IPR003613 GO:0004842|GO:0016567
Mal2g2349 527 SMART arm_5 320 360 IPR000225 GO:0005515
Mal2g2349 527 SMART arm_5 279 319 IPR000225 GO:0005515
Mal2g2349 527 SMART arm_5 238 278 IPR000225 GO:0005515
Mal2g2349 527 SMART arm_5 400 443 IPR000225 GO:0005515
Mal2g2349 527 SUPERFAMILY ARM repeat 211 480 IPR016024 -
Mal2g2349 527 Pfam U-box domain 26 95 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2349 Mal-Chr2 29249707 29251290 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2349 1 527 U-box Gene Family AT5G65200 57.451 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2349 - - gmx:100784564 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2349 2 29249707 29251290 Mal2g2349 2 29249707 29251290 ECH