Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2341 ATGGCGATAGCAGTAGCAAGCAGACAACTATTCATAGATGGAGAGTGGAAAGCTCCTCTCCTCAACAAAAGGATTCCAATAATCAATCCCTCCACTGAAAACATCATAGGGGATATACCAGCTGGTACTAAGGAAGATGTTGACCTTGCTGTGGATGCTGCTAAAAGAGCCATTTCCAGGAACAAAGCTAGAGATTGGTCTAGTACTGCTTCTGGTTCTGTTCGTGCTGGCTATCTTCGAGCAATCGCCGCAAAGATAACGGAGAAAAAGAATGAACTAGGCAAACTTGAATCAATTGATTGTGGAAAACCACTAGATGAAGCACTAGGGGACATGGATGGTGTTATTGGTTGTTTTGAGTACTATGCTGGACTTGCTGAAGGGTTGGATGCAAAGCAAAAGGCTCCTGTATCCCTTCCTATGGATACCTTCAAAAGCCATGTTCTCAAGGAGGCTATTGGTGTTGTTGCATTAATTACTCCATGGAACTATCCTCTCTCAATGGCGGCAAGGAAAATTGCTCCAGCTCTGGCTGCTGGTTGTGCTGCAATATTGAAGCCGTCTGAATTGGCATCTGTGACTTGTTTGGAGTTAGGCGAAATATGCAGAGAAGTTGGCCTTCCTCCTGGTGTCTTAAATATTGTCACTGGATTAGGCCATGAAGCTGGTGCTTCTTTGGCATCCCATCCTGATGTAGATCAGATTTCCTTTACCGGTAGCTCTGCAACTGGTAGCAAGATTATGACAGCTGCGGCACAGCTAATCAAGCCTGTTTTTCTAGAACTTGGTGGAAAGAGCCCAATCGTTGTTTTTGAGGATGTTGACCTTGATAAGGTTGCTGAATGGACCATCTTTGGCTGCTTCTTTACAAATGGTCAGATATGCAGTGCAACATCTCGCCTTATTGTGCATGAAAGTATAGCTGTAGAATTTGTGAATAGACTTGTGAAATGGACCAAAAACATCAAAATTTCAGATCCCTTGGAAGAAGGTTGCAGGCTAGGCCCTATTGTCAGTGAAGCACAGTATATGAAAGTATTGAATTTTATCTCAACGGCTAAGAGTGAGGGTGCAACAATTTTGACTGGTGGGCGTCGACCAGAGAATTTAAAGAAGGGATACTTTGTTGAACCAACCATCATAACCGATGTGACTACCTCGATGCAAATTTGGAGAGAAGAAGTTTTTGGACCTGTACTCTCTGTGAAAACATTTAGCACTGAGGAAGAAGCTATTGATCTAGCCAATGACACCCACTATGGCTTGGGATCAGCTGTGATGTCAAATGATTTAGAAAGATGTGAGCGCCTATCCAAGGCTCTTCAAGCTGGAGTTGTATGGATCAATTGTTCACAACAAAGCTTTGTTCGAGCTCCATGGGGAGGCATTAAACGTAGTGGTTTTGGTCGCGAATTAGGAGAATGGGGATTTGATAATTACTTGAGTGTGAAGCAAGTTACTAGGTACATATCTGATGAGCAGTGGGGATGGTATCAATCCCCTTCAGAGATGTGA 1515 0.4343 MAIAVASRQLFIDGEWKAPLLNKRIPIINPSTENIIGDIPAGTKEDVDLAVDAAKRAISRNKARDWSSTASGSVRAGYLRAIAAKITEKKNELGKLESIDCGKPLDEALGDMDGVIGCFEYYAGLAEGLDAKQKAPVSLPMDTFKSHVLKEAIGVVALITPWNYPLSMAARKIAPALAAGCAAILKPSELASVTCLELGEICREVGLPPGVLNIVTGLGHEAGASLASHPDVDQISFTGSSATGSKIMTAAAQLIKPVFLELGGKSPIVVFEDVDLDKVAEWTIFGCFFTNGQICSATSRLIVHESIAVEFVNRLVKWTKNIKISDPLEEGCRLGPIVSEAQYMKVLNFISTAKSEGATILTGGRRPENLKKGYFVEPTIITDVTTSMQIWREEVFGPVLSVKTFSTEEEAIDLANDTHYGLGSAVMSNDLERCERLSKALQAGVVWINCSQQSFVRAPWGGIKRSGFGRELGEWGFDNYLSVKQVTRYISDEQWGWYQSPSEM* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2341 504 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 1 504 - -
Mal2g2341 504 CDD ALDH_F10_BADH 27 488 - -
Mal2g2341 504 SUPERFAMILY ALDH-like 6 487 IPR016161 GO:0016491
Mal2g2341 504 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 260 267 IPR029510 GO:0016491
Mal2g2341 504 Pfam Aldehyde dehydrogenase family 23 486 IPR015590 GO:0016491
Mal2g2341 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 268 459 IPR016163 GO:0016620
Mal2g2341 504 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 504 - -
Mal2g2341 504 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 288 299 IPR016160 GO:0016491
Mal2g2341 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 484 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2341 Mal-Chr2 29117172 29122321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2341 1 502 Aldehyde Dehydrogenase Gene Family AT1G74920 74.701 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2341 K00130 - gmx:100170755 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2341 2 29117172 29122321 Mal2g2341 2 29117172 29122321 ECH
Mal5g4149 5 111914451 111918939 Mal2g2341 2 29117172 29122321 PCT