Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2335 ATGGTGGCTCTGCTGGTTGTTGCCGCCGCCAGCTTCTTCGCCTCCTTAGTGGCATCCTTCCTGCTGGTTGTTGCCGCCACCTTCATCGCCTCTGTAGTGGTAGCCTGTTGCTGCCTAATCCAAATCTGCTCCCAACGCCAGAGAAACCTTCAATATTACAACATGGAGTCCGGCCTTCAATACGAATCAACAACGGTGGAGGAGGCCCCACACGGTCACGTTGGATTAGAAGAGTCAGTTATAAACGTCATTCCGTCGTTCATCTACACCACTACTAATTCTAAACAAGAAGAATCTCGTCGTGACTGTGTTATTTGCTTGCATGAATTTAAAGACAATGATCATGTTCGTACCCTCCCTCTTTGCTCCCACACTTTTCACCTCAAATGTATTGATGTTTGGCTTCGTAAACATCCTAATTGTCCACTTTGTCGCTCATGTCTTTGTTGTGCTCAGTCTAATCAGGTTTAA 471 0.465 MVALLVVAAASFFASLVASFLLVVAATFIASVVVACCCLIQICSQRQRNLQYYNMESGLQYESTTVEEAPHGHVGLEESVINVIPSFIYTTTNSKQEESRRDCVICLHEFKDNDHVRTLPLCSHTFHLKCIDVWLRKHPNCPLCRSCLCCAQSNQV* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2335 156 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Mal2g2335 156 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 17 150 - -
Mal2g2335 156 SMART ring_2 103 144 IPR001841 -
Mal2g2335 156 Pfam Ring finger domain 102 145 IPR001841 -
Mal2g2335 156 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 150 IPR013083 -
Mal2g2335 156 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 17 150 IPR044675 -
Mal2g2335 156 SUPERFAMILY RING/U-box 83 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2335 Mal-Chr2 29082166 29082636 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2335 1 148 C3H Transcription Factor Family AT3G18930 33.125 2.87e-25 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2335 - K19041 mtr:MTR_3g078450 144.821