Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal2g2320 | ATGGGTGCATACAAGTACATTTCTGAGCTATGGCGCAAGAAGCAATCGGATGTGATGAGATTCATGCAGCGTGTGAGGTGTTGGGAGTATCGTCAACAATCCTCCATTGTTCGTCTCACCAGGCCTACTCGTCCTGACAAGGCTCGCCGTTTGGGATACAAGGCTAAGCAGGGATATGTTGTGTACCGTGTGAGGGTACGCAGAGGTGGGAGAAAGAGGCCAGTTTCCAAGGGTATCGTTTATGGTAAGCCCACAAACCAGGGAGTTACCCAACTGAAGTTTCAAAGGAGCAAGAGGTCAGTTGCTGAGGAGCGTGCTGGAAGGAAGCTTGGTGGTCTCAGGGTTCTCAATTCCTACTGGGTCAATGAGGATTCTACCTTCAAATACTTTGAGGTCGTTTTGGTTGATGTTGCTCACACTGCTATAAGAAATGACCCAAGAATCAACTGGCTCACCAACCCTGTCCACAAGCATAGGGAACTTCGTGGACTCACTTCTGCTGGAAAAGAAAACAGAGGTTTGAGTGGCAAGGGGCATCGTTACCACAAAGCCCGTCCATCTCGCAGGGCAAACTGGAAGAGAAACAACACCCTTTCACTTCGTCGCTACCGTTAA | 615 | 0.4927 | MGAYKYISELWRKKQSDVMRFMQRVRCWEYRQQSSIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVSKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTFKYFEVVLVDVAHTAIRNDPRINWLTNPVHKHRELRGLTSAGKENRGLSGKGHRYHKARPSRRANWKRNNTLSLRRYR* | 205 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal2g2320 | 204 | SUPERFAMILY | Ribosomal proteins S24e, L23 and L15e | 1 | 195 | IPR012678 | GO:0003735|GO:0005840|GO:0006412 | |
| Mal2g2320 | 204 | PANTHER | RIBOSOMAL PROTEIN L15 | 1 | 204 | IPR000439 | GO:0003735|GO:0005840|GO:0006412 | |
| Mal2g2320 | 204 | PANTHER | RIBOSOMAL PROTEIN L15 | 1 | 204 | - | - | |
| Mal2g2320 | 204 | SMART | Ribosomal_L15e_2 | 2 | 193 | IPR000439 | GO:0003735|GO:0005840|GO:0006412 | |
| Mal2g2320 | 204 | MobiDBLite | consensus disorder prediction | 164 | 189 | - | - | |
| Mal2g2320 | 204 | Pfam | Ribosomal L15 | 2 | 191 | IPR000439 | GO:0003735|GO:0005840|GO:0006412 | |
| Mal2g2320 | 204 | ProSitePatterns | Ribosomal protein L15e signature. | 46 | 69 | IPR020925 | GO:0003735|GO:0005840|GO:0006412 | |
| Mal2g2320 | 204 | Gene3D | Ribosomal protein l15e | 1 | 204 | IPR024794 | GO:0003735|GO:0005840 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal2g2320 | Mal-Chr2 | 28881904 | 28883244 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal2g2320 | 1 | 204 | Cytoplasmic Ribosomal Protein Gene Family | AT4G16720 | 87.255 | 3.58e-122 | 342 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal2g2320 | K02877 | - | gmx:100305473 | 374.4 |