LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g2287	ATGGATTTTCTGCAGAGTCAGAGGGTAGAGGTGATAACCATGGCAGTAGCTCTTGTTGCCATTGTTGGTGGCACCGCTTACTATTACTATCTCACCAAGAAGCCCAAAGGGTGCTTGGATCCTGAGAAATTCAAGGAATTTAAGCTTGTTAAACGCACTCAGCTCAGTCATAATGTTGCCACGTTCAGATTTGATCTTCCTAGTCATAGCTCAGTGTTGGGGCTTCCTATTGGACAACATATCAGCTGCAGAGGAAAAGACAGTCTTGGTGAAGAAGTAATCAAACCATATACACCAACAACATTGGATACTGATGTTGGATACTTTGAATTGGTCGTTAAGATGTATCCACAAGGAAGAATGTCTCATCACTTTAGTGAGATGCGTGAAGGCGATTACTTAGCTGTGAAAGGACCAAAGGGACGTTTTAAGTACCAACCCAACCAAGTAAAAGCTTTTGGAATGGTTGCTGGTGGCACTGGCATCACACCAATGTTTCAGGTTGCAAGAGCTATACTAGAAAATCCACAGGACAAAACCAACGTAAATTTGATATATGCCAATGTCACATATGATGACATTCTTCTAAAGGAAGAGCTGGATGACTTGGCAATTAAGTTCCCAAATCGATTTAAAGTTTATTATGTTCTAAATCAGCCACCAGAAATATGGAATGGTGGAGTCGGATTCGTTTCCAAGGAAATGATTGAAACTCAATTCCCTGCACCAGCACCGGATATTAAGATATTAAGGTGTGGACCACCTCCCATGAATAAGGCTATGGCTGCTCATCTTGAAGCTCTTGGATACAGTCCCCAAATGCAGTTTCAGTTTTAG	837	0.417	MDFLQSQRVEVITMAVALVAIVGGTAYYYYLTKKPKGCLDPEKFKEFKLVKRTQLSHNVATFRFDLPSHSSVLGLPIGQHISCRGKDSLGEEVIKPYTPTTLDTDVGYFELVVKMYPQGRMSHHFSEMREGDYLAVKGPKGRFKYQPNQVKAFGMVAGGTGITPMFQVARAILENPQDKTNVNLIYANVTYDDILLKEELDDLAIKFPNRFKVYYVLNQPPEIWNGGVGFVSKEMIETQFPAPAPDIKILRCGPPPMNKAMAAHLEALGYSPQMQFQF*	279

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g2287	278	Pfam	Oxidoreductase NAD-binding domain	155	261	IPR001433	GO:0016491
	Mal2g2287	278	CDD	cyt_b5_reduct_like	47	278	-	-
	Mal2g2287	278	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	1	278	-	-
	Mal2g2287	278	SUPERFAMILY	Ferredoxin reductase-like, C-terminal NADP-linked domain	134	273	IPR039261	-
	Mal2g2287	278	ProSiteProfiles	Ferredoxin reductase-type FAD binding domain profile.	42	146	IPR017927	GO:0016491
	Mal2g2287	278	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	1	278	IPR001834	GO:0016491
	Mal2g2287	278	SUPERFAMILY	Riboflavin synthase domain-like	35	148	IPR017938	-
	Mal2g2287	278	PRINTS	Cytochrome B5 reductase signature	248	256	-	-
	Mal2g2287	278	PRINTS	Cytochrome B5 reductase signature	73	84	-	-
	Mal2g2287	278	PRINTS	Cytochrome B5 reductase signature	95	102	-	-
	Mal2g2287	278	PRINTS	Cytochrome B5 reductase signature	192	203	-	-
	Mal2g2287	278	PRINTS	Cytochrome B5 reductase signature	154	173	-	-
	Mal2g2287	278	PRINTS	Cytochrome B5 reductase signature	131	145	-	-
	Mal2g2287	278	Pfam	Oxidoreductase FAD-binding domain	47	145	IPR008333	-
	Mal2g2287	278	Gene3D	Translation factors	35	134	-	-
	Mal2g2287	278	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	154	173	IPR001709	GO:0016491
	Mal2g2287	278	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	192	203	IPR001709	GO:0016491
	Mal2g2287	278	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	248	256	IPR001709	GO:0016491
	Mal2g2287	278	Gene3D	-	135	278	IPR039261	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g2287	Mal-Chr2	28445602	28449651	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g2287	27	278	NADPH P450 reductases	AT5G17770	79.365	7.44e-154	429

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g2287	K00326		-	gmx:100812559	513.457