LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g2269	ATGAAGACAATTTTTTTTAATCTAATCATGGCTTACAATCTGAAACAGAAACTGTTCTCAATTATTCTTCTGTTCTGCATAATTTTTTCACCAACTGAAACAGCATCAACATTCAGCCATTCCAATTGCACAACCACAAAAAAGTTTAGTCCAAAAAGCACTTACCAAACCAATCTAAACACACTCTTATCAACACTTTCATCCAAAGCTTCTGATACACTCAGCCTTGGCTACTACAACACTAGTATTAGTACAACTAATAAAACAGAAGATACTGTCTATGGTCTCTTCATGTGCATAGGAGATTCTCATACTACAAATCACTGTGGAGAATGTGTTAAAAAATCTACCAAAACACTTACCTCAATATGTAACTTAATTAAAGAAGCTATAATTTGGTCTGGTGAATGCTTGGTGCGTTATTCTGATCGATCTTTCTTCGGCACTTTGGAAGAATCTCCATCATGGTGTGTGAAGGACACAATGGATTATCCAGGTCCATTGGAAAGATTCAACAAAATGCTAAGTTCTTTGAGGGTGGATCTTGTAACTCGAGCAAATAAAGCTTCAAATGCAAATTCTATTAAATTTGTTCGCAAGAAAGCAATTTACTATGAGGATAAATTCTTGTATGGACTTGCTCAGTGCATACCAAATCTCTCTAATGATAATTGCATGAAGTGTTTAAATGATGCTGTTGATTATCTTCAAACCTCATGTGCTAGAAGAAAGATTAGAGCAAGTGTTTTATATCCAAGTTGTATTGTTAGATATGATCCTTATCCATTTTCGGAACAACCTATAGGTTTGAATTTTCAACATTTTGCACTATATAAGATAGTGGTTTTAATTATTTCAAGTAAATTGAGGTTAACACTAATCTGTGTTGCAGAAAAAAGCGAGGAAAATGAAGAAGAAATTTTTAAAATAATTTTTCATGTTCTTGTTCCTGTCATGATTTGCTCCGTTGTGGTTTTCTTTTTCGCGTATTATCTGATACGTAGGAGAGCGAACAAGAATCTCATGTACCACAAAGAACATTTTGGGGAAGAGATTACATCAGAAGTAAACTCTCTGCAATTTGATTTCGATATGATTCGACTAGCAACAAACAAGTTCTCTGAAGATAACAAAATAGGGGAAGGTGGTTTTGGAGATGTTTACAAGGGAATGTTTCCTAATGGATTTGAAATAGCAGTAAAGAGACTCATAAGAAATTCAAGTCAAGGAGCAGTGGAATTTAAGAATGAGGTGTTGTTAATAGCCAAGCTTCAACACAGAAATCTTGTGAGACTGTTAGGATTTTGCATTCAAAGGAATGAGAAGATACTTATTTATGAATATATGCACAACAAAAGCCTTGATTATTACCTATTCAGTCCTGAGAACCATAGAAAATTAACTTGGCATGCACGCTACAAGATTATAAGAGGGATTGCACGAGGTATTCTTTATCTACATGAGGATTCTCATCTAAAAATCATACACTGTGATCTTAAACCCAGCAACATTTTGTTGGATGACAAAATGAATGCAAAGATATCAGATTTTGGCTTGGCAAGGATTGTTGCCATTGATCAAATGCAAGGAAATACTAGTATAATTGCTGGGACATAG	1617	0.3438	MKTIFFNLIMAYNLKQKLFSIILLFCIIFSPTETASTFSHSNCTTTKKFSPKSTYQTNLNTLLSTLSSKASDTLSLGYYNTSISTTNKTEDTVYGLFMCIGDSHTTNHCGECVKKSTKTLTSICNLIKEAIIWSGECLVRYSDRSFFGTLEESPSWCVKDTMDYPGPLERFNKMLSSLRVDLVTRANKASNANSIKFVRKKAIYYEDKFLYGLAQCIPNLSNDNCMKCLNDAVDYLQTSCARRKIRASVLYPSCIVRYDPYPFSEQPIGLNFQHFALYKIVVLIISSKLRLTLICVAEKSEENEEEIFKIIFHVLVPVMICSVVVFFFAYYLIRRRANKNLMYHKEHFGEEITSEVNSLQFDFDMIRLATNKFSEDNKIGEGGFGDVYKGMFPNGFEIAVKRLIRNSSQGAVEFKNEVLLIAKLQHRNLVRLLGFCIQRNEKILIYEYMHNKSLDYYLFSPENHRKLTWHARYKIIRGIARGILYLHEDSHLKIIHCDLKPSNILLDDKMNAKISDFGLARIVAIDQMQGNTSIIAGT*	539

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g2269	538	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	34	268	-	-
	Mal2g2269	538	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	302	538	-	-
	Mal2g2269	538	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	494	506	IPR008271	GO:0004672\|GO:0006468
	Mal2g2269	538	Pfam	Protein kinase domain	374	526	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal2g2269	538	ProSiteProfiles	Protein kinase domain profile.	373	538	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal2g2269	538	SMART	serkin_6	373	535	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal2g2269	538	Pfam	Salt stress response/antifungal	43	143	IPR002902	-
	Mal2g2269	538	Pfam	Salt stress response/antifungal	167	259	IPR002902	-
	Mal2g2269	538	Gene3D	-	156	263	IPR038408	-
	Mal2g2269	538	Gene3D	-	35	146	IPR038408	-
	Mal2g2269	538	Gene3D	Transferase(Phosphotransferase) domain 1	449	538	-	-
	Mal2g2269	538	Gene3D	Phosphorylase Kinase; domain 1	334	448	-	-
	Mal2g2269	538	ProSitePatterns	Protein kinases ATP-binding region signature.	379	401	IPR017441	GO:0005524
	Mal2g2269	538	SUPERFAMILY	Protein kinase-like (PK-like)	353	533	IPR011009	-
	Mal2g2269	538	ProSiteProfiles	Gnk2-homologous domain profile.	152	263	IPR002902	-
	Mal2g2269	538	ProSiteProfiles	Gnk2-homologous domain profile.	37	146	IPR002902	-
	Mal2g2269	538	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	34	268	-	-
	Mal2g2269	538	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	302	538	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g2269	Mal-Chr2	28168181	28170092	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g2269	18	538	Receptor kinase-like Gene Family	AT4G05200	41.379	3.27e-124	378

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Mal2g2269		Pkinase	1.9e-32	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g2269	-		-	mtr:MTR_3g079850	822.387