Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2259 ATGAAGAGGTTCAATAATTCAGAAACTATGTCTTCTTTGATTTCCATGTACCAATCCAAAGGGATGGATGAGAGGAATGAGACAAAAGGTTACAGTGAAGAATTTCAAGCAATGTTAGATAGGTTGGAGCAAGAAGATAGCTATGAAGAAGGTAGCTCAATGTTGGAGAAGAAAAGAAGACTTGGTTATGATCAAGTAAAAGCTTTAGAAAAGAGCTTTGAATTGGACAACAAGTTAGAGCCAGAGAGAAAAGTGAAGTTAGCTGAAGAATTAGGCTTGCAACCTAGACAAGTTTCGATTTGGTTCCAAAATCGTCGAGCTCGAACAAAAACCAAACAATTGGAAAGAGATTATAGTGTTCTTAAGTCCAATTTTGATGTTCTTAAGGTTGAGTATAGTAATCTTCAACAAGAGAATGAGACTCTTACTGTAAAGTTAAGAGAGTTGAAAGCAAGAGTTGAAAACAATGAGTTAGAGAAAGAAGAAGAATGTCCAATTTCAAGGGGTAGAGAAATAGGAGGTTCAGAGAGCAATTCAAGTGGTGTGGTTAAGGAAGAAAGTTATGTTGATTCTCCTGTATGTTTCAATGGATCTTTGCCAAGTTCAATGATAAATTTGGTTCATTATTATGATTCAAGAGGGTCTCATGAGAGTGTATTTCAGAATCACTTTATGAGAATGGAGGAGCAAAATTTCTTTAGTAATAGTGAATTATTCAGTTTCTTTTCTGTTGATCAATCTCCTACTTTGTAA 753 0.3493 MKRFNNSETMSSLISMYQSKGMDERNETKGYSEEFQAMLDRLEQEDSYEEGSSMLEKKRRLGYDQVKALEKSFELDNKLEPERKVKLAEELGLQPRQVSIWFQNRRARTKTKQLERDYSVLKSNFDVLKVEYSNLQQENETLTVKLRELKARVENNELEKEEECPISRGREIGGSESNSSGVVKEESYVDSPVCFNGSLPSSMINLVHYYDSRGSHESVFQNHFMRMEEQNFFSNSELFSFFSVDQSPTL* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2259 250 Pfam Homeobox associated leucine zipper 112 153 IPR003106 GO:0006355|GO:0043565
Mal2g2259 250 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 5 236 IPR045224 GO:0003700
Mal2g2259 250 CDD homeodomain 57 113 IPR001356 GO:0003677
Mal2g2259 250 ProSitePatterns 'Homeobox' domain signature. 87 110 IPR017970 GO:0000981|GO:0006355
Mal2g2259 250 SMART HOX_1 55 116 IPR001356 GO:0003677
Mal2g2259 250 Pfam Homeodomain 58 110 IPR001356 GO:0003677
Mal2g2259 250 Gene3D - 62 110 - -
Mal2g2259 250 SUPERFAMILY Homeodomain-like 48 114 IPR009057 -
Mal2g2259 250 ProSiteProfiles 'Homeobox' domain profile. 52 112 IPR001356 GO:0003677
Mal2g2259 250 PRINTS Lambda-repressor HTH signature 83 92 IPR000047 GO:0003677
Mal2g2259 250 PRINTS Lambda-repressor HTH signature 92 108 IPR000047 GO:0003677
Mal2g2259 250 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-6 5 236 - -
Mal2g2259 250 Coils Coil 104 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2259 Mal-Chr2 27926044 27927030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2259 16 153 Homeobox Transcription Factor Family AT5G65310 56.376 1.82e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mal2g2259 Homeodomain 2.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2259 K09338 - zju:107420758 226.868