Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2256 ATGAGAGGAACCAGATTGATATCGTTGTTCTCAAAGCAGCAGTTACATCCTTATACTCATTCTCAATGGAGATTCTTCAACTCTTCTTCTTCATCATCGCTTTCCTCTAACAAGCTCTTCGTTGGAGGATTATCATGGTCTGTTGACGAAAAGTCCCTCAAAGATGCTTTCTCTTCCTTTGGACACGTCACTGAAGTGAGGATAGTGTATGATAAAGATAGTGGTAGGGCTAGAGGATTTGGATTTGTCATCTTTTCAAATGAAGATGATGCATCATCTGCAAAAGATGCAATGGATGGAAAGGTTAGATATTAA 315 0.3905 MRGTRLISLFSKQQLHPYTHSQWRFFNSSSSSSLSSNKLFVGGLSWSVDEKSLKDAFSSFGHVTEVRIVYDKDSGRARGFGFVIFSNEDDASSAKDAMDGKVRY* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2256 104 PANTHER TRANSFORMER-2-RELATED 27 102 - -
Mal2g2256 104 SUPERFAMILY RNA-binding domain, RBD 28 102 IPR035979 GO:0003676
Mal2g2256 104 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL 27 102 - -
Mal2g2256 104 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 39 102 IPR000504 GO:0003723
Mal2g2256 104 Gene3D - 12 103 IPR012677 -
Mal2g2256 104 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 37 104 IPR000504 GO:0003723
Mal2g2256 104 SMART rrm1_1 38 103 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2256 Mal-Chr2 27905304 27905930 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2256 29 94 C2H2 Transcription Factor Family AT2G19380 37.879 1.08e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2256 - - cam:101502883 135.191