Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2253 ATGAGAGGAACCAGATTGATATCGTTGTTCTCAAAGCAGCAGTTACATCCTTATACTCATTCTCAATGGAGATTCTTCAACTCTTCTTCTTCATCATCGCTTTCCTCTAACAAGCTCTTCGTTGGAGGATTATCATGGTCTGTTGACGAAAAGTCCCTCAAAGATGCTTTCTCTTCCTTTGGACACGTCACTGAAGTGAGCATAGTGTATGATAAAGATAGTGGTAGGGCTAGAGGATTTGGATTTGTCATCTTTTCAAATGAAGATGATGCATCATCTGCAAAAGATGCAATGGATGGAAAGGCACTGTTAGGTAGACCATTGAGGATAAATTTTGCTCTCGAGAAGCCTCGTGGTATACCTGTTGTAGTTCCTCGATTTTCAAATAACGGACACTAA 399 0.4035 MRGTRLISLFSKQQLHPYTHSQWRFFNSSSSSSLSSNKLFVGGLSWSVDEKSLKDAFSSFGHVTEVSIVYDKDSGRARGFGFVIFSNEDDASSAKDAMDGKALLGRPLRINFALEKPRGIPVVVPRFSNNGH* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2253 132 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 37 115 IPR000504 GO:0003723
Mal2g2253 132 Gene3D - 12 119 IPR012677 -
Mal2g2253 132 PANTHER TRANSFORMER-2-RELATED 27 131 - -
Mal2g2253 132 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 39 109 IPR000504 GO:0003723
Mal2g2253 132 SMART rrm1_1 38 111 IPR000504 GO:0003723
Mal2g2253 132 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL 27 131 - -
Mal2g2253 132 SUPERFAMILY RNA-binding domain, RBD 28 120 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2253 Mal-Chr2 27862664 27863243 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2253 29 117 C2H2 Transcription Factor Family AT2G19380 37.079 5.01e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2253 - - cam:101502883 179.104