LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g2210	ATGGATTCTGAAATCGATGATGTTGGTGTTGTGGAGAAAGATCCAACTTTGCGTTACGCACGGTATGATGAAATGTTAGGGAAAGGAGCCTTCAAGACTGTTTATAAAGCGTTTGATGAAGTAGATGGAATAGAAGTTGCTTGGAATCAAATTAGTATAGAGGATGTTATGCAATCACCCCAGAATTTGGAAAAGTTGTATTCTGAGGTTCACCTGCTCAAGTCACTGAAACATGAAAATATCATTAAGATGTATAGCTCTTGGGTGGACGAAAAGAGCAGCAATATCAACATGATAACTGAATTGTTCACCTCTGGAAGTTTGAGGCAGTATCGTAAGAAACATAGGAATGTGGATATGAAGGCTATCAAGAACTGGGCGAGGCAGATTCTTCGTGGCTTGTGCTTTCTGCACAGTCACAGTCCTCCTGTTATTCACAGGGATCTGAAATGTGATAATCTTTTCGTTAACGGGAACAATGGACAAGTTAAGATTGGAGATCTAGGATTGGCAATTGTCATGCAGCAACCTACTGCCCGGAGTGTTATTGGTACTCCAGAATTCATGGCCCCAGAGCTTTATGAGGAAGAATACAATGAACTTGTTGACATATATTCCTTTGGCATGTGTATCTTGGAAATGATCACCTGCGAGTACCCGTATAGTGAATGCAAAAATCCGGCGCAGATATATAAGAAAGTTACCTCTGGTATAAAGCCTGCTGCTCTTGCTAAAGTGAATGATCCTGAAGTGAAGCGATTTATAGAGAAGTGTTTAGTTCCAGCATCCATGAGATTGCCTGCATCTGAACTGCTGAAAGATCCATTCCTTGCAACTGGAAATACGAAGGAGATCTATCATGATAACCTACTGCTTCCTAATCCCCCCAGCAAATCAATGAGCTCACCAACTACTGAGCCCCATCCCATGGATATAGATTCAAACGTCAAGCATACATCACCTGGATCCTCTGTGGAAAGAGATAAAGAAACTTCTCAAGTTTCAAATGCTGATCTCCTGAGGAAGACAGAGAACAATGAATTTCGGTTAAAAGGGGAGAAGAACGCTGAAAGGACAATTTCACTGACACTCCGAATTGCTGATGCTCATGGTGGAGTTAGAAATATCCATTTTCCATTCTATATCGATTCAGACACAACAATTTCAATTGCTGAGGAGATGGTGGAAGATCTGGAACTCAAGGATGAGGATGTAGCTGTCATTGCTGAGCTAATACACAACATGATTTTTAAGCTTGTGCCTGACTGGAAACCTTTGTGTGAGAACCTCTCATCTGGAACAGATAATTTGTACATGCCTTCGGAAGCTCAGAATGATGAACAGTTAAACTGCCATTGGACATTGGGATCAAATAATTTTGATATGAAGGCAATGTATGAGGATTTAGGTCACTCACAGCTTGATGGGGAAGATCAGGACAAACAAGAATCTGTTTCATCAGATATTTCAGCGGAGTATGGGTCTGATTCAAAAGGTGTAGAGCCCGATTGTTTTATTCTTCATGAATGCTGCAAGGGATCCAACGGCTTAAATTCCAATTCAGATGTCAGAATTTGTGGTCAAGAAGATGGAAACAATAATCAATCAGAGAACTCAGCAGTATCATGTTGCAGTCCATCCAAAATCCTTGACGTATCAAGCAAATGCTCTTTTACTGCACTTGACAAAGATCATTTAGACGAGCTACAGTTGGAGCTTGAAGCAATTGAAATCCAGTATCAGCGAAGTTATCGTGAGCTTGTGAAGATGAGGGAGGAAGCCATAGAAAATGTCAAAAAGAGATGGAGTTCAAGGAAGAAAATACCAGTTGTATGA	1836	0.4074	MDSEIDDVGVVEKDPTLRYARYDEMLGKGAFKTVYKAFDEVDGIEVAWNQISIEDVMQSPQNLEKLYSEVHLLKSLKHENIIKMYSSWVDEKSSNINMITELFTSGSLRQYRKKHRNVDMKAIKNWARQILRGLCFLHSHSPPVIHRDLKCDNLFVNGNNGQVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMITCEYPYSECKNPAQIYKKVTSGIKPAALAKVNDPEVKRFIEKCLVPASMRLPASELLKDPFLATGNTKEIYHDNLLLPNPPSKSMSSPTTEPHPMDIDSNVKHTSPGSSVERDKETSQVSNADLLRKTENNEFRLKGEKNAERTISLTLRIADAHGGVRNIHFPFYIDSDTTISIAEEMVEDLELKDEDVAVIAELIHNMIFKLVPDWKPLCENLSSGTDNLYMPSEAQNDEQLNCHWTLGSNNFDMKAMYEDLGHSQLDGEDQDKQESVSSDISAEYGSDSKGVEPDCFILHECCKGSNGLNSNSDVRICGQEDGNNNQSENSAVSCCSPSKILDVSSKCSFTALDKDHLDELQLELEAIEIQYQRSYRELVKMREEAIENVKKRWSSRKKIPVV*	612

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g2210	611	Pfam	Oxidative-stress-responsive kinase 1 C-terminal domain	360	416	IPR024678	GO:0004674\|GO:0005524
	Mal2g2210	611	Coils	Coil	566	593	-	-
	Mal2g2210	611	Gene3D	-	358	451	-	-
	Mal2g2210	611	PANTHER	SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED	1	606	-	-
	Mal2g2210	611	MobiDBLite	consensus disorder prediction	316	334	-	-
	Mal2g2210	611	PANTHER	WNK KINASE	1	606	-	-
	Mal2g2210	611	MobiDBLite	consensus disorder prediction	294	309	-	-
	Mal2g2210	611	Pfam	Protein kinase domain	23	277	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal2g2210	611	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	144	156	IPR008271	GO:0004672\|GO:0006468
	Mal2g2210	611	SUPERFAMILY	Protein kinase-like (PK-like)	23	322	IPR011009	-
	Mal2g2210	611	Gene3D	Phosphorylase Kinase; domain 1	4	101	-	-
	Mal2g2210	611	SMART	serkin_6	20	277	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal2g2210	611	Gene3D	Transferase(Phosphotransferase) domain 1	103	284	-	-
	Mal2g2210	611	MobiDBLite	consensus disorder prediction	288	334	-	-
	Mal2g2210	611	CDD	STKc_WNK	18	277	-	-
	Mal2g2210	611	MobiDBLite	consensus disorder prediction	473	497	-	-
	Mal2g2210	611	ProSiteProfiles	Protein kinase domain profile.	20	277	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g2210	Mal-Chr2	27269198	27271846	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g2210	3	610	MAP Kinase Kinase Kinase	AT5G41990	51.480	0.0	566

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	WNK_NRBP	Mal2g2210		Pkinase	6.9e-52	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g2210	K08867		-	gmx:100783717	882.863