Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2204 ATGAATGTAAGGAAACATGATATGATGATGAGTAGTGTTCCACAAACTGCAAGTTCTCCTCCTACTCCTCCACATATGTATCCAGAGGAACTTCAACTTAAGCTTTACCAAGCTTTCATATTCTCAATTCCTATACTTTTTTCTATTATTCTCTTTCTCCTTTTTTACTTGTTCTACCTCAAGAGAAGAGCTTCTTCTTTCTCTCCACACTTACTTCCTAGGATCAATATTCCTCCAACTACATATCGTTATTATTCATCTTCCTCACCTCGTCGTTTGGATTTGACCGTGCAATTCTTGGACAAACTTCCTAGAATTTTGTTTGATGAGGATTTACAAGCAAGGGATTCATTATGTTGTGTTTGTTTGGGAGAATTTGAGGTGAAAGAAGAGTTACTACAGATTCCATATTGCAAACATGTGTTCCACATCGATTGCATACATCATTGGCTACAATCAAATTCAACTTGTCCACTTTGTAGATGTTCCATCATTCCCACTACTACTAAGTTCCTTAATCCAGCACCCCCTATTAATATTATTATATCAGACCCACCCCACCAAGATGCTATCAATTCAGATTCTCCATTACAAATTTCATCATTGCCAGATGAAGTTGGTGCTTCCTCAAATATTATGTCAAGGGAATAA 651 0.3671 MNVRKHDMMMSSVPQTASSPPTPPHMYPEELQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSFSPHLLPRINIPPTTYRYYSSSSPRRLDLTVQFLDKLPRILFDEDLQARDSLCCVCLGEFEVKEELLQIPYCKHVFHIDCIHHWLQSNSTCPLCRCSIIPTTTKFLNPAPPINIIISDPPHQDAINSDSPLQISSLPDEVGASSNIMSRE* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2204 216 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHA4A-RELATED 14 178 - -
Mal2g2204 216 ProSiteProfiles Zinc finger RING-type profile. 119 161 IPR001841 -
Mal2g2204 216 MobiDBLite consensus disorder prediction 193 216 - -
Mal2g2204 216 SUPERFAMILY RING/U-box 97 168 - -
Mal2g2204 216 SMART ring_2 119 160 IPR001841 -
Mal2g2204 216 Pfam Ring finger domain 119 161 IPR001841 -
Mal2g2204 216 MobiDBLite consensus disorder prediction 1 23 - -
Mal2g2204 216 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 166 IPR013083 -
Mal2g2204 216 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 14 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2204 Mal-Chr2 27177288 27178927 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2204 24 166 C3H Transcription Factor Family AT4G10150 39.726 6.49e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2204 K19039 - aprc:113858113 280.026