Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2189 ATGGGTCGGCACCAACGAGCCAAGTCACGCGGAGCCGCCGCTGCTGCTGCTAAAAGATCCAAGAGAAACAAGGCTGCTTTAAATGCTGAGGATTTAGAAACTTCATCTACAGGCAAGGGAATAACTGATGGCAAGGTATCACTATATCACTGTAATTACTGCAAGAAAGATATTTCAGGGAAGATTCACATCAAATGCGCCGTGTGTCAAGATTTTGATCTCTGCGTGGAGTGCTTCTTTGTTGGTGCCGAGGTGACACCTCATAAAAGCAATCATCCATATCGGGTTATGGATGATCTATCTTTTCCGCTTACATGTCCAGATTGGACTACATGTGAAGAGAAGTTACTTCTTGAGGCCCTTGACATGTATGGATTTGGGAATTGGAATGCTGTTGCTGAAATTGTTGGGACGAAAAGCAAATCTCAGTGTATTGAACACTATAATGCTGTATATATGAATTCGCCATGTTTTCCTTTACCTGATTTGTCTTATTCTAAGGGAAAGAACAAAGAGGAACTCCTTGCCATGGCAAAGGAACGTCAACACAAGAAAGAATTCCCACCAAATGCAGAGCTGACTTTGGAAAAACCTCTCTTTTCTGTTGGCATAAACTCTGCAAAATCCAAGAAGGTGGAAACCACTAATCTGGCAATGTCTAGGCCGAACTCAGCATGCGATAAAGGTCTTGCAAGTACAATCAAGAAGGCTTCCAATGTGAGCCAGAATAATGATGGAGTTAAGGTGGAAGAATCTCAAGCAGGTCGGAGCATTGGTGAAAAGAAACCTAAATTATCTGAGGAATCTAGGCCTTCTATGGAAGTGTTGAGTGGGTACAATTCTAAGAGAGGTGAATTTGTCATTGAATACGACAATGATGCTGAGCAAGTTTTGGCTGAAATGGAATTTAAGGACAGTGATACGGAAGCTGAACATGAAATGAAACTGAAGGTTCTCCGTAGCTATGGAAAAAAGTTAGATGAACGAAAGCGCAGAAAAGATTTTATACTTGAAAGAAATTTACTTTCTCCCAATCCTTTTGAGAAATATCTCTCACCTGAAGAGCTGCAAATATGTGAACAGTACAAGGTCTTCATGCGGTTTCACTCAAAAGAAGAGCACGAGGAGTTGCTAAAAACTATCATTGAAGAACATCGGCTTGCCAAAAGAATAAAAGACTTACAGGAAGCTAGAAAAGCTGGCTGTGTAACTGCTGCTGAAGCTTATCAATTTATTGAACAAAAGAGGACAAAAGAAGCTGAAAAAGGTGACTGTAAAGAAACAAGTGGCAAGACTTCACAGAGGCCAAATTTTTCCAAAGTAGAGCATGGTAGTAGCTCACGAGGTATCCATAAGGGCACTACATCATCATTTCCTGATATCAAGGATGCACCGCCGGCCATACAAGCTATCACAAGGACACTAGAAGAATGGGATATCAGCGATTTTGATGGAGCTGAATTGCTAACTGAACCTGAGATAAAGCTTTGTAATGAGATCAGAATGCTACCACCAGACTACCTCAACTTTAAGCAGATCATGCAATTAGAAATTTCGAAGGGCAGGGTAACCAAGAAATCTGATGCATATCCACTGTTCAAGGTGTCTCCAAGCAGGATTGATAGAATTTATGACATGCTTGTGGAACAAGGAGTTGTTCAAGCATAA 1668 0.4113 MGRHQRAKSRGAAAAAAKRSKRNKAALNAEDLETSSTGKGITDGKVSLYHCNYCKKDISGKIHIKCAVCQDFDLCVECFFVGAEVTPHKSNHPYRVMDDLSFPLTCPDWTTCEEKLLLEALDMYGFGNWNAVAEIVGTKSKSQCIEHYNAVYMNSPCFPLPDLSYSKGKNKEELLAMAKERQHKKEFPPNAELTLEKPLFSVGINSAKSKKVETTNLAMSRPNSACDKGLASTIKKASNVSQNNDGVKVEESQAGRSIGEKKPKLSEESRPSMEVLSGYNSKRGEFVIEYDNDAEQVLAEMEFKDSDTEAEHEMKLKVLRSYGKKLDERKRRKDFILERNLLSPNPFEKYLSPEELQICEQYKVFMRFHSKEEHEELLKTIIEEHRLAKRIKDLQEARKAGCVTAAEAYQFIEQKRTKEAEKGDCKETSGKTSQRPNFSKVEHGSSSRGIHKGTTSSFPDIKDAPPAIQAITRTLEEWDISDFDGAELLTEPEIKLCNEIRMLPPDYLNFKQIMQLEISKGRVTKKSDAYPLFKVSPSRIDRIYDMLVEQGVVQA* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2189 555 Gene3D - 107 156 - -
Mal2g2189 555 Pfam Zinc finger, ZZ type 49 89 IPR000433 GO:0008270
Mal2g2189 555 MobiDBLite consensus disorder prediction 239 273 - -
Mal2g2189 555 Gene3D - 470 555 IPR036388 -
Mal2g2189 555 ProSiteProfiles SWIRM domain profile. 469 555 IPR007526 GO:0005515
Mal2g2189 555 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 8 554 - -
Mal2g2189 555 ProSiteProfiles SANT domain profile. 104 156 IPR017884 -
Mal2g2189 555 Gene3D - 44 97 IPR043145 -
Mal2g2189 555 SUPERFAMILY Homeodomain-like 472 554 IPR009057 -
Mal2g2189 555 SUPERFAMILY RING/U-box 49 110 - -
Mal2g2189 555 Pfam Myb-like DNA-binding domain 108 149 IPR001005 -
Mal2g2189 555 PIRSF Txn_adaptor_ADA2 36 555 IPR016827 GO:0003713|GO:0006357|GO:0035065
Mal2g2189 555 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 8 554 IPR034318 GO:0003713|GO:0006357|GO:0035065
Mal2g2189 555 ProSiteProfiles Zinc finger ZZ-type profile. 46 102 IPR000433 GO:0008270
Mal2g2189 555 ProSitePatterns Zinc finger ZZ-type signature. 51 78 IPR000433 GO:0008270
Mal2g2189 555 MobiDBLite consensus disorder prediction 430 454 - -
Mal2g2189 555 ProSiteProfiles Myb-like domain profile. 109 152 IPR001005 -
Mal2g2189 555 CDD ZZ_ADA2 49 97 IPR041983 -
Mal2g2189 555 SMART zz_5 45 90 IPR000433 GO:0008270
Mal2g2189 555 SMART sant 105 154 IPR001005 -
Mal2g2189 555 SUPERFAMILY Homeodomain-like 102 155 IPR009057 -
Mal2g2189 555 MobiDBLite consensus disorder prediction 420 463 - -
Mal2g2189 555 CDD SANT 109 149 IPR001005 -
Mal2g2189 555 MobiDBLite consensus disorder prediction 254 269 - -
Mal2g2189 555 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2189 Mal-Chr2 26978779 26991968 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2189 1 552 EF-hand Containing Proteins AT3G07740 49.215 3.27e-170 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal2g2189 Myb_DNA-binding 1.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2189 K11314 - gmx:100779424 761.911