Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2185 ATGCTTAATGCAACATATGTTGTAATGTTGTTTCTTTCTTTGCATTCTGCTTTTAGATCCACGAGACAAAAGACTGCTTTAAATGCTAAGGGTTTAGGAACTTCATCTACAGGCAAGGGAATAACTGGTGGCAAGGCATCACTGCATCATTGTAATTACTGCAAGAAAGACATTTCAGAGAAAGTTCACATCAAATGCGCCGAGTGTCAAGATTTTGATCTATGCATCGAGTGCTTCACTATTGGTGCCGAGGTGACACCTCACAAAAGTAATCATTCATATCGGGTTATGGAAAATCTCTCTTTTCCGCTTACATGTCCAGATTGGGATGTGCGTGAAGAGAATTTACTTCTTGATGGCCTTGAAATGTATGGATTTGGAAATTGGAAAGGTGTTGCTGAAAAAGTTGGTACGAAAAGCGAATCTGAGTGTATTGACCACTATAAGACTGTATATCTGAATTCGCCAGGTTTTCTACCGGATTTGTCTTATTCTAAGGGAAAGAGCATAGAGGAACTCTGTGCCATGAGAAAGGAACATAAACTCAAGAAAGAAGTTCCTCCAAATGCTAAGCTGGCTCTGAAAGAACCTGTCTCTTCTTATGGAATAAACTCTGATGAATCTAAGGCAGGAAGCAGCTCTAATCAAACAATGTCTAGGCCAACTTCAGGAGATAAAGCTATGTGA 687 0.3974 MLNATYVVMLFLSLHSAFRSTRQKTALNAKGLGTSSTGKGITGGKASLHHCNYCKKDISEKVHIKCAECQDFDLCIECFTIGAEVTPHKSNHSYRVMENLSFPLTCPDWDVREENLLLDGLEMYGFGNWKGVAEKVGTKSESECIDHYKTVYLNSPGFLPDLSYSKGKSIEELCAMRKEHKLKKEVPPNAKLALKEPVSSYGINSDESKAGSSSNQTMSRPTSGDKAM* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2185 228 MobiDBLite consensus disorder prediction 197 228 - -
Mal2g2185 228 SUPERFAMILY Homeodomain-like 102 154 IPR009057 -
Mal2g2185 228 SMART sant 105 154 IPR001005 -
Mal2g2185 228 Pfam Zinc finger, ZZ type 50 89 IPR000433 GO:0008270
Mal2g2185 228 Gene3D - 44 99 IPR043145 -
Mal2g2185 228 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 18 225 - -
Mal2g2185 228 ProSitePatterns Zinc finger ZZ-type signature. 51 78 IPR000433 GO:0008270
Mal2g2185 228 SUPERFAMILY RING/U-box 49 109 - -
Mal2g2185 228 Gene3D - 104 154 - -
Mal2g2185 228 ProSiteProfiles SANT domain profile. 104 156 IPR017884 -
Mal2g2185 228 ProSiteProfiles Myb-like domain profile. 109 152 IPR001005 -
Mal2g2185 228 CDD SANT 109 151 IPR001005 -
Mal2g2185 228 MobiDBLite consensus disorder prediction 201 228 - -
Mal2g2185 228 ProSiteProfiles Zinc finger ZZ-type profile. 46 102 IPR000433 GO:0008270
Mal2g2185 228 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 18 225 IPR034318 GO:0003713|GO:0006357|GO:0035065
Mal2g2185 228 CDD ZZ_ADA2 50 97 IPR041983 -
Mal2g2185 228 Pfam Myb-like DNA-binding domain 109 150 IPR001005 -
Mal2g2185 228 SMART zz_5 45 90 IPR000433 GO:0008270
Mal2g2185 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 109 156 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2185 Mal-Chr2 26920299 26923780 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2185 19 200 EF-hand Containing Proteins AT3G07740 47.692 1.58e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal2g2185 Myb_DNA-binding 5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2185 K11314 - gmx:100779424 270.781