Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2131 ATGGGCCTATCAAATCTTCCAGCACCATCTGAAGGAGTGTTATGCATCATTCTAGTAAACACTGCCATGTCAATATCCATATTCAAAGGCATTATTAGGACTATCCTACACATTGTTGGTATCATTGCATCACCTTCAACCTCTCCTTCACAAGATTACATCCCTCAAAACTCACCTGACTCATTTGAATTCCATCTAAGTCCTTCAGATGATTTCATTGAAGAGTTCAGAAGCAGGACACCAGCACTTAGGTTTGACAGTGTGTGTAGTAGCTGCAAAGAACCTGAACATGATTGTTCAGTGTGCCTCACTCAATTTGAACCTGAATCAGAGATAAACTACTGTGTATCTTGTGGCCATGTTTTCCATAAAGTGTGTTTGGAGAAGTGGTTGGATTATTGGAACATTACATGTCCACTTTGTAGGAGTCCTTTAATTCCTGAAGATGATGCATCTTGCTTATGGTAA 468 0.3974 MGLSNLPAPSEGVLCIILVNTAMSISIFKGIIRTILHIVGIIASPSTSPSQDYIPQNSPDSFEFHLSPSDDFIEEFRSRTPALRFDSVCSSCKEPEHDCSVCLTQFEPESEINYCVSCGHVFHKVCLEKWLDYWNITCPLCRSPLIPEDDASCLW* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2131 155 ProSiteProfiles Zinc finger RING-type profile. 99 142 IPR001841 -
Mal2g2131 155 Pfam Ring finger domain 98 142 IPR001841 -
Mal2g2131 155 PANTHER - 1 155 IPR044249 -
Mal2g2131 155 SMART ringv_2 98 142 IPR011016 GO:0008270
Mal2g2131 155 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 147 IPR013083 -
Mal2g2131 155 SUPERFAMILY RING/U-box 90 147 - -
Mal2g2131 155 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED 1 155 - -
Mal2g2131 155 SMART ring_2 99 141 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2131 Mal-Chr2 26203789 26204256 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2131 1 149 C3H Transcription Factor Family AT2G04240 55.484 7.68e-55 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2131 K16285 - gmx:100786803 250.751