Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2128 ATGGCTTCCAGAAAGTCCGATAACCCTCACTCCGGCGACGGTGCCAGTCCCGGGAAAATCTTCATCGGAGGGTTAGCCAAAGATACAACCCCAGAGACGTTTGTGAAGTACTTTGAAAGATACGGAGAGATAACGGATTCCGTTATCATGAAGGATCGTCATACGGGTCGACCCAGAGGATTCGGGTTTATCACTTATGCGGATCCTGCAGTTGTTGATCAAGTTATTCAGGAGAATCACATCATCAATGATAAGCAGGTTGAAATCAAGAGGACTATTCCAAAGGGTGCTTCACACTCTAATGACTTCAAAACTAAGAAGATTTTTGTTGGTGGCATTCCTGCAGCTGTATCTGAAGATGAGCTCAAGAACTTCTTTTCCAAGCATGGGAATGTTGTGGAGCATGAGATAATACGCGACCACACTACTAAGCGATCTCGTGGATTTGGTTTTGTAGTTTTTGATAGTGATAAGGCTGTTGATAATTTGTTAGCTGATGGGAACATGATTGATATGGATGGTACTCAGGTTGAGATCAAGAAGGCTGAACCAAAGAAATCTTCAAATTCATCTTCTTTTCCTTCATTTGCTAGTGATTCTAGGGCACGTTCTTACAATGGTGGTTTTGGTGGATTTGATGATTCTTATGGAAGTTTTCCTGGTGGAGGTTATGGCCCTGCATCTTATAGGTCAGTTGGAGGTTTCGGTGGTAGGTTTAGCGATTATGGTGGGTATGGAGGCGGAGATGATTTCAGTGGTGGTTTTGGAGGTTATGGGGGCAGTGGTGGTGTTGGTGGTTATGCGGGATATAGAGGAGGAGAATCTTCATTTGGTTACTCTGGCCGCTATGGCTCCTACATGGGTGGCCTAGGTGGTGGATATGGTGGTGGTGGGGTAGGCCCATATGGGAGAGGTGGTGGGGGCTATGGAAGTTATGGAGGTCCAGGCACTGGTGGAGGTTATGAATCTGGCCCTGGTGCTGGTTTTGGTGGGGCAGGAGGACCCTATTCTAGTAGGGGAGGTTATGGGGGCAGTAGTCGTTACCATCCTTACACAAGATAG 1062 0.4652 MASRKSDNPHSGDGASPGKIFIGGLAKDTTPETFVKYFERYGEITDSVIMKDRHTGRPRGFGFITYADPAVVDQVIQENHIINDKQVEIKRTIPKGASHSNDFKTKKIFVGGIPAAVSEDELKNFFSKHGNVVEHEIIRDHTTKRSRGFGFVVFDSDKAVDNLLADGNMIDMDGTQVEIKKAEPKKSSNSSSFPSFASDSRARSYNGGFGGFDDSYGSFPGGGYGPASYRSVGGFGGRFSDYGGYGGGDDFSGGFGGYGGSGGVGGYAGYRGGESSFGYSGRYGSYMGGLGGGYGGGGVGPYGRGGGGYGSYGGPGTGGGYESGPGAGFGGAGGPYSSRGGYGGSSRYHPYTR* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2128 353 SMART rrm1_1 107 180 IPR000504 GO:0003723
Mal2g2128 353 SMART rrm1_1 19 90 IPR000504 GO:0003723
Mal2g2128 353 Gene3D - 97 218 IPR012677 -
Mal2g2128 353 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 106 184 IPR000504 GO:0003723
Mal2g2128 353 Gene3D - 18 96 IPR012677 -
Mal2g2128 353 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 1 353 - -
Mal2g2128 353 MobiDBLite consensus disorder prediction 1 22 - -
Mal2g2128 353 SUPERFAMILY RNA-binding domain, RBD 101 212 IPR035979 GO:0003676
Mal2g2128 353 MobiDBLite consensus disorder prediction 180 199 - -
Mal2g2128 353 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 108 171 IPR000504 GO:0003723
Mal2g2128 353 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 20 82 IPR000504 GO:0003723
Mal2g2128 353 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 18 94 IPR000504 GO:0003723
Mal2g2128 353 PANTHER OS08G0320100 PROTEIN 1 353 - -
Mal2g2128 353 SUPERFAMILY RNA-binding domain, RBD 9 96 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2128 Mal-Chr2 26160565 26162391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2128 4 177 Eukaryotic Initiation Factors Gene Family AT1G71770 26.042 1.99e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2128 K12741 - gmx:100801373 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2128 2 26160565 26162391 Mal8g0091 8 1620599 1624254 PCT