Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2098 ATGAGTTTCATCGACGACGGCGGCATCGACTTAGACCCCTCCGATTTCGGCACATCAGTCCCCTTAAAAAAAGTCCCAAACGGCGACGTTTTCCAAGCCTCACGTGCCGGCGACCTCGACCGTCTCCGTTACCTTCTAGAATGCGGCGTTAACGTCAACGCACGTGATCAATGGGACTCCACCGCACTCTACTACGCTTGCCTCGCCGGTCACCTCGACGCCGCTCGTATGCTTCTCGAAAACGGCGCTATTTGCTCCGAACACACGTTTGACGGTGACCGTTGTCATTACTCTGCTCTTAATTTGAAGGTGAGGAAGCTTCTTAAAGCATTTGAAGCTCGTCCTCCTCCGTTGAATCCGTTGCAGAGTTCTCTTCGTGATACTTTCTTCGCTTGTCCTTCTAATTCGCTTTCTAGTGGCTTTCACTTTCCCGGTATTTCATCCACTCAAGGGTTCAGTAGCAACTACTTTCCCCCAGATGTGGTTTTTACTGTACAAGGAAGACCCATTGAAGCTCACAGAGTCATATTAAGTGCAAGGTCGCCATTTTTCAAGAAAAAGTTTGAGACTGATTGGAAAGAGCGCAGTGAAGTAAGATTTGCACGAGAAAAGTTGTCATATCCTGCACTTTGTAGCCTTATACATTTCTTTTATTCAGACAGATTAGAAATTGTTGTGGATGACATGGAGGATCTTGTGAGAATTTGCAAAGTATGCAAATGGTCTATCCCTTCCTGA 738 0.4675 MSFIDDGGIDLDPSDFGTSVPLKKVPNGDVFQASRAGDLDRLRYLLECGVNVNARDQWDSTALYYACLAGHLDAARMLLENGAICSEHTFDGDRCHYSALNLKVRKLLKAFEARPPPLNPLQSSLRDTFFACPSNSLSSGFHFPGISSTQGFSSNYFPPDVVFTVQGRPIEAHRVILSARSPFFKKKFETDWKERSEVRFAREKLSYPALCSLIHFFYSDRLEIVVDDMEDLVRICKVCKWSIPS* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2098 245 ProSiteProfiles Ankyrin repeat profile. 58 83 IPR002110 GO:0005515
Mal2g2098 245 ProSiteProfiles Ankyrin repeat region circular profile. 58 83 - -
Mal2g2098 245 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 7 240 IPR044515 -
Mal2g2098 245 SMART ANK_2a 58 87 IPR002110 GO:0005515
Mal2g2098 245 SMART ANK_2a 27 54 IPR002110 GO:0005515
Mal2g2098 245 SMART BTB_4 159 244 IPR000210 GO:0005515
Mal2g2098 245 Gene3D Potassium Channel Kv1.1; Chain A 147 241 IPR011333 -
Mal2g2098 245 Gene3D - 10 140 IPR036770 -
Mal2g2098 245 SUPERFAMILY POZ domain 151 238 IPR011333 -
Mal2g2098 245 SUPERFAMILY Ankyrin repeat 32 111 IPR036770 -
Mal2g2098 245 Pfam Ankyrin repeats (many copies) 45 92 IPR002110 GO:0005515
Mal2g2098 245 ProSiteProfiles BTB domain profile. 159 226 IPR000210 GO:0005515
Mal2g2098 245 Pfam BTB/POZ domain 157 234 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mal2g2098 BTB 4e-15 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2098 K10520 - qsu:111999987 395.586