Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2091 ATGAGAGGAAGAAGCTACAGTCCATCTCCGCCACCGCGTTACAGCAGAAGAGGCGGAGGAGGAGGAGGAAGTCCAAGTCCTCGCCGACGTTACGCTCCCCGTCAAAGTGATCTACCTACCAGTCTTCTTGTTCGTAACCTTCGCTATGACTGTAGACCTGAAGATCTTAGTACACCTTTTGGTTATTTTGGTCCTCTTAAGGACATTTATCTCCCTAAAGATTATTACACTGGACAACCTCGTGGTTTTGGTTTTATCCAATTTGTGGATCCTGCTGATGCTGCCGATGCAAAATATCATATGGATGGTCAAGTTCTTCTTGGTCGGGAGCTCACTGTTGTTTTTGCTGAGGAAAATAGAAAGAAGCCAACTGAGATGAGGGTTAGAGAGAGAAGTGGTCGCTATTCTGATCAACGGAGGTCTCCCCCATGCTATTCTCGTTCACCCCGCTATTCCCGGTCTCCACCACCTCGTCACAGATCTCGCTCTCGCGGCAGTCGGGACTATTATTCCCCTCCTCCTAAACGAAGGGAATCTTCAAGGTTTGGAATGTGTAACATAGTAAACGTTTCAAGGGGCAGAAGACCTCACAGTGACGTTAGGCAAATGGGCCGGCCCGGGAGGCCCGTCCATATAAAAGGGCCGGTTAATTTTTAA 657 0.4855 MRGRSYSPSPPPRYSRRGGGGGGSPSPRRRYAPRQSDLPTSLLVRNLRYDCRPEDLSTPFGYFGPLKDIYLPKDYYTGQPRGFGFIQFVDPADAADAKYHMDGQVLLGRELTVVFAEENRKKPTEMRVRERSGRYSDQRRSPPCYSRSPRYSRSPPPRHRSRSRGSRDYYSPPPKRRESSRFGMCNIVNVSRGRRPHSDVRQMGRPGRPVHIKGPVNF* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2091 218 Gene3D - 27 208 IPR012677 -
Mal2g2091 218 MobiDBLite consensus disorder prediction 161 175 - -
Mal2g2091 218 MobiDBLite consensus disorder prediction 120 137 - -
Mal2g2091 218 SMART rrm1_1 41 114 IPR000504 GO:0003723
Mal2g2091 218 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 118 IPR000504 GO:0003723
Mal2g2091 218 PANTHER SERINE/ARGININE-RICH SC35-LIKE SPLICING FACTOR SCL30A 1 178 - -
Mal2g2091 218 MobiDBLite consensus disorder prediction 1 38 - -
Mal2g2091 218 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 1 178 - -
Mal2g2091 218 MobiDBLite consensus disorder prediction 120 218 - -
Mal2g2091 218 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 111 IPR000504 GO:0003723
Mal2g2091 218 SUPERFAMILY RNA-binding domain, RBD 39 141 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2091 Mal-Chr2 25789901 25794746 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2091 40 148 Eukaryotic Initiation Factors Gene Family AT4G34110 29.730 1.60e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2091 K12900 - gmx:100775883 221.476