Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2074 ATGTGCAAAACTTTAGTTACCATACTGTTATTATTTGTGTTTGAAATGTTTATTCCTTATTCTTACAGGACAGTAGACACTAGAGGTAATGCCACACATAGGTTTCTGAACAACCTCACCAACACCACGGAGGAAAGTAGTCTAAAAGTGCGCATTGCTAGACTATGGGACAATATTAATGTCCGCAACAAAACTGAATTGATCAGTATAGATATGGTGTTGATTGATGAAGAGGGCAATTACATCCATGCTACCGTACCCAAGAGATCTGCAGATTTATTCCGAAAAAAATCAATCCAGGAGGGAAAGATATATGTCATTACAAAATTTGCAGTGTCAAACAACAAAAAAAAGTATCCTGTGGTTGAACGCAATTCTTCAATGTTACAGATCAATGCTAACACCAAATTCACTGAGGAGGACTATGATGATGGCAAGATCCCTCTCCATGTTTTTGAATTTGTAAGTTATGAACATTTGGAGGCTCGAATTGGCAAAGATGTGTATACAGATATAATTGGAGTTATAGTTGATGTCAATTCAATTGAGCAGAGGAGAACTGCTAATGGTATAGTGGATATTATGTCAGTTCAGCTAAAAGATATAAGTGGAAACGCATTCAACGTCACATTGTGGGATAAATATGCTACAATCTTTGATAAGACACTAAAAAGGTCTCTGCATGACGCTCCTACCTCAAATCCAAATGTTGCAGTTATCACATCCGCTATAGTCAAGACATTTCAAGGTGATGTATGTTTTAACTCATCAAGTGCAACAAAGATTTATATCAATATAGACATCCCGGAAGCAACTCAACTCATTGAGTCATTCAAGAGTACCAATGATTTACCATCATCCGAAAATGCGGGTCTTGCAGGTTCTGCTGTCCTTTACAAACTAGACAAGACAAGGACTATATCTGAAATTTTAAGTTTGGCAAGATCAGGGAATAAGGTGGTAAACAACTTGGGTAACAAATATTGCTTATCGTTATTCATGTTTGATGGGCTATAA 1017 0.3677 MCKTLVTILLLFVFEMFIPYSYRTVDTRGNATHRFLNNLTNTTEESSLKVRIARLWDNINVRNKTELISIDMVLIDEEGNYIHATVPKRSADLFRKKSIQEGKIYVITKFAVSNNKKKYPVVERNSSMLQINANTKFTEEDYDDGKIPLHVFEFVSYEHLEARIGKDVYTDIIGVIVDVNSIEQRRTANGIVDIMSVQLKDISGNAFNVTLWDKYATIFDKTLKRSLHDAPTSNPNVAVITSAIVKTFQGDVCFNSSSATKIYINIDIPEATQLIESFKSTNDLPSSENAGLAGSAVLYKLDKTRTISEILSLARSGNKVVNNLGNKYCLSLFMFDGL* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2074 338 Pfam Replication protein A OB domain 165 253 IPR031657 -
Mal2g2074 338 PANTHER REPLICATION FACTOR A 1, RFA1 36 280 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal2g2074 338 Pfam Domain of unknown function DUF223 72 139 IPR003871 -
Mal2g2074 338 SUPERFAMILY Nucleic acid-binding proteins 36 138 IPR012340 -
Mal2g2074 338 Gene3D - 146 285 IPR012340 -
Mal2g2074 338 PANTHER BNAC01G35430D PROTEIN 36 280 - -
Mal2g2074 338 SUPERFAMILY Nucleic acid-binding proteins 153 280 IPR012340 -
Mal2g2074 338 CDD RPA1_DBD_B_like 171 280 - -
Mal2g2074 338 CDD RPA1_DBD_A_like 47 137 - -
Mal2g2074 338 Gene3D - 34 139 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2074 Mal-Chr2 25545254 25546689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2074 74 274 Core DNA Replication Machinery Family AT5G08020 28.571 5.27e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2074 - - mtr:MTR_4g070090 253.062