Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2072 ATGGTGAATGTACTTGGCCTTGAAGAAGCTGTTGAGCCACCGGCTTTACCTCCATCACCTCCTGATGTGCTGTCTAATATGGAAACAGAACAAATAGCTCTCCCAACGTATTCTATTATCAGTAGGCCTAGTGTTGGGACCACAGGAAAACGCATACCTTTGCTTGCAAATTTCTTCAAAGTTACTGCTGATGCTACAGATACAACCTATTTCCAGTATAGTGTTACTATCACTTCGGAAGATAAAAGAGCTGTTGAAAGCAAGGGCATCGGGAGAAAACTGATTGATCAGCTTCACCAAACATACTCTTCTGAACTTGGTGGCAAAAGCTTTGCGTACGATGGAGAAAAAACTTTGTACACAGTGGGTCCTCTTCCAGATAATCAATTTGAGTTCACAGTATTACTTGAGGAAACATTTGCAAGTAGTACTGAGAGTCCTGCTGCTAATGGAAGCCCTCATGAGGAAAATAAAAGGTCAAAACGTTCTTTTCAGTCAAAGGCATTCACAGTGGAGATAAATTTTGCTGCCGAAATACCCTTGCAGTCCATTGCTCTTTCCCTTAAAGGGATTGAGTCTTATGCTAATTCTCAGGATGCATTGAGGGTGCTTGATACCATACTGAGGCAGCGAGCAGCTAAAAGAGGGTGTCTTTTGGTAAGGCAATCCTTTTTTCATGATGACTCGAGGAATTTCATTGATGTTGGAGGTGGAGTAGAAGGAGTTCGGGGTTTTCATTCCAGTTTTCGTCTTACACAGGGAGGATTGTCTCTTAATATGGATGTGTCCACAACGATGATTGTAAAACCTGGACCTGTAATTGATTTTCTCCTATCCAACCAGAGTGTGAGAGAACCTCGTTATATTGACTGGGCAAAGGCCAAGAGAATCCTTAAAAATTTAAGAGTTCGTGCTACACATCGTAACCAAGAATTCAAAATCTCGGGCTTGAGTGAGAAATCCTGCATTCAACAACTTTTTAGTATGAAGATGAAAAATGGAGAAGACAATAATGTGGAGCAGACAGTGGATATTACTGTATATGATTATTTTGCTAAACACCGTGGCATTGAGCTGACCTCTTCTGCTTACTTTCCATGTCTTGATGTTGGGAAGCCAAATCGACCCAACTTTTTGCCCCTGGAGCTATGTTCACTTGTTCCTCTCCAGCGGTATACAAAGGCATTATCTCCTGTGCAAAGAGCATCTTTAGTAGAAAAATCACGCCAAAAGCCTCAAGAAAAAATCAAGATTCTGACAAATGCTATAGGAAATTCTAGCTATGATGATGATGCTGTTCTTGCGGCATGTGGCATTTCTATTGACAAGCAATTCACTCCAGTTGAAGGTCGAGTTCTTGAGACACCAAAGTTGAAGGTAGGTAAGAACGAGGACTGCTTCCCCAATGATGGAAGGTGGAATTTTAAAACGAAGACACTTCTACAACCATCACATATTGATTATTGGGCTGTTGTCAACTTTTCTAAACAATGTGATACTAGTTACATAACAAGGGAGCTGATCAAATGTGGAATGAGCAAGGGAATGAATATTGAACGGCCATATACTTTAATAGAGGAAGAAGCACAAATGAGAAAATCTAACCCTGTTGCAAGAGTTGAAAAGATGTTTGACTTGCTATCACCAAAACTTTGTAAAGATCCAAAATTGATTCTTTGTGTCTTGCCAGAGAGGAAAAACTGTGACATCTATGGGCCTTGGAAAAGGAAGTGTCTGAGTGAAGTTGGGATTGTCACACAGTGCATTTCCCCTCTCAAGATCACTGATCAATACCTTACTAACGTACTTCTTAAAATCAATTCTAAGCTTGGTGGAATAAATTCTTTGCTGGCAATAGAGCATTCTGGGCATCTTCCCTTGATTAAAGATACCCCGACGATGATTTTAGGGATGGATGTCTCTCATGGTTCCCCTGGCCGATCAGATATTCCATCAATAGCAGCTGTTGTTGGATCTCGATGCTGGCCTCTAATTTCGAGATATAGAGCATCTGTGAGATCACAGTCTCCTAAGGTGGAGATGATTGATGCTCTATTCAAGCCTTTGGATGATAAGAATGATGATGGCATTATCAGGGAATTGCTTCTAGATTTCTATAGTACAAGTGGAAACCGCAAACCAACTCAAATTATTCTCTTCAGGGACGGAGTTAGTGAATCTCAATTTCAACAGGTTTTGAATGTAGAGCTTAACCAGATAATAAAGGCCTATAAACATATTGATGAGGTTGGGGACGTTCCCAAGTTCACTGTAATTGTGGCACAGAAGAATCACCACACAAAGCTGTTTCAAGCCAATGCGCTGGAAAACGTTCCTCCTGGGACAGTTGTCGACACAAAAATTGTGCATCCAAGACATTATGATTTCTACATGTGTGCTCATGCTGGAAGGATTGGAACATCTAGGCCTGTACATTATCATGTGTTGCTTGATGAAATTGGATTTTCGCCAGATGGCTTGCAAAACTTGATCAATTCGCTGTCTTATGTGAACCAAAGGAGCACAACTGCAACCTCAATTGTGGCGCCTATATGCTATGCCCACCATGCAGCAGCTCAAATGGGACAATTTCTGAATTTCAATGATTTATCAGAAGCATCTTCAAGTCCCGATTCAGAGGGAAACATCCCCATTCCAGAGCTTCCAAGGTTGCATTCAAAGGTCAGAACTTCCATGTTCTTCTGTTGA 2709 0.4116 MVNVLGLEEAVEPPALPPSPPDVLSNMETEQIALPTYSIISRPSVGTTGKRIPLLANFFKVTADATDTTYFQYSVTITSEDKRAVESKGIGRKLIDQLHQTYSSELGGKSFAYDGEKTLYTVGPLPDNQFEFTVLLEETFASSTESPAANGSPHEENKRSKRSFQSKAFTVEINFAAEIPLQSIALSLKGIESYANSQDALRVLDTILRQRAAKRGCLLVRQSFFHDDSRNFIDVGGGVEGVRGFHSSFRLTQGGLSLNMDVSTTMIVKPGPVIDFLLSNQSVREPRYIDWAKAKRILKNLRVRATHRNQEFKISGLSEKSCIQQLFSMKMKNGEDNNVEQTVDITVYDYFAKHRGIELTSSAYFPCLDVGKPNRPNFLPLELCSLVPLQRYTKALSPVQRASLVEKSRQKPQEKIKILTNAIGNSSYDDDAVLAACGISIDKQFTPVEGRVLETPKLKVGKNEDCFPNDGRWNFKTKTLLQPSHIDYWAVVNFSKQCDTSYITRELIKCGMSKGMNIERPYTLIEEEAQMRKSNPVARVEKMFDLLSPKLCKDPKLILCVLPERKNCDIYGPWKRKCLSEVGIVTQCISPLKITDQYLTNVLLKINSKLGGINSLLAIEHSGHLPLIKDTPTMILGMDVSHGSPGRSDIPSIAAVVGSRCWPLISRYRASVRSQSPKVEMIDALFKPLDDKNDDGIIRELLLDFYSTSGNRKPTQIILFRDGVSESQFQQVLNVELNQIIKAYKHIDEVGDVPKFTVIVAQKNHHTKLFQANALENVPPGTVVDTKIVHPRHYDFYMCAHAGRIGTSRPVHYHVLLDEIGFSPDGLQNLINSLSYVNQRSTTATSIVAPICYAHHAAAQMGQFLNFNDLSEASSSPDSEGNIPIPELPRLHSKVRTSMFFC* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2072 902 Pfam PAZ domain 274 404 IPR003100 GO:0005515
Mal2g2072 902 Pfam Piwi domain 557 865 IPR003165 GO:0003676
Mal2g2072 902 Gene3D - 624 902 IPR036397 GO:0003676
Mal2g2072 902 Pfam N-terminal domain of argonaute 50 208 IPR032474 -
Mal2g2072 902 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 32 901 - -
Mal2g2072 902 ProSiteProfiles PAZ domain profile. 298 388 IPR003100 GO:0005515
Mal2g2072 902 CDD Piwi_ago-like 433 860 IPR045246 -
Mal2g2072 902 SUPERFAMILY PAZ domain 265 428 IPR036085 GO:0005515
Mal2g2072 902 Pfam Argonaute linker 2 domain 417 459 IPR032472 -
Mal2g2072 902 SMART Piwi_a_2 557 866 IPR003165 GO:0003676
Mal2g2072 902 SMART DUF1785_2 218 270 IPR014811 -
Mal2g2072 902 ProSiteProfiles Piwi domain profile. 557 866 IPR003165 GO:0003676
Mal2g2072 902 PANTHER PROTEIN ARGONAUTE 6 32 901 - -
Mal2g2072 902 Pfam Argonaute linker 1 domain 220 268 IPR014811 -
Mal2g2072 902 SUPERFAMILY Ribonuclease H-like 542 864 IPR012337 -
Mal2g2072 902 Gene3D paz domain 264 392 - -
Mal2g2072 902 CDD PAZ_argonaute_like 270 387 - -
Mal2g2072 902 Gene3D - 452 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2072 Mal-Chr2 25518443 25526093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2072 42 902 Eukaryotic Initiation Factors Gene Family AT1G48410 36.744 1.21e-162 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2072 K11593 - gmx:100778875 1387.47