Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2066 ATGGAGGAAACAATGGCGGCAAGATATTGGTGTCACGCCTGTTCTCAAATAGTCAGTCCCGTCATGGGAATGGAGATCAAATGTCCACTTTGCCAAAGTGGATTTGTTGAAGAAATGAGCAGTGCTACTGGTATCAGTGACATGCAAAATATACCAGAAACTGATTTTGGAGTGGATCGTTCTCCTCCCTCCCTTTGGGCACCAATCTTGTTAGGGATGATGGGCAATCCGCGGCTTCGTCGAAGATTGAGACGAATAGAGCTTGAAGAGGATTATGATAGTGGTAATCGTGATGATGATCATGGTGGTGTAGGGCATTATGATCGAGAGCTAGAGTCCATCCTTCGAAGGAGGAGAAGAAGCTCAGCTACCATTCAGCAATTGCTCCAAGGCATAAGAGCTGGACTGACATCTGAATCGCATGAGAATACTGACAGTGATGACCGTGTTAGGGAAAGAGAAAGAGAGCATGTAATCTTGATTAATCCTTTTAATCAGACTATTATAGTTCAAGGTTCCTATGATTCCAACCGGGATCAGAGTGATAATCATAACCCCATTGGGTCTCTGGGTGACTATTTCGTAGGGCCTGGTTTGGATCTATTGTTGCAACATTTGTCCGAGAATGACCCTAATAGGTATGGAACTCCACCAGCACCGAAGGAAGCCGTTGAAGCTCTACCTACTGTGAAGATCAATGAGAATTTGCAGTGTTCTGTCTGTTTGGATGATTTTGAAGTTGGTTCTGAAGCTAAAGAGATGCCATGTAAACATAGGTTTCATAGTGCTTGTATCCTGCCCTGGCTGGAGCTTCATAGTTCTTGTCCGGTTTGCAGGTCTCAATTGCGAGTGGATGAAGCTAAGCAAGACTCTGATGCGTCAAGGAATCTCAGAAATCAAAGGGGGGATGGAAATATTGGACATGCCAATACCAATGCTGAAGGAGATAGTGAAGGGAGAACTCCAAGTGGGGGTAGAAGATTCTCATTTCCATGGCCTTTCAATGGATTATTTTCTTCATCATCTTCTAGCTCCAATGCAAATGGAAATGGTACTCAATCAGAAAGAAACTGA 1074 0.4395 MEETMAARYWCHACSQIVSPVMGMEIKCPLCQSGFVEEMSSATGISDMQNIPETDFGVDRSPPSLWAPILLGMMGNPRLRRRLRRIELEEDYDSGNRDDDHGGVGHYDRELESILRRRRRSSATIQQLLQGIRAGLTSESHENTDSDDRVREREREHVILINPFNQTIIVQGSYDSNRDQSDNHNPIGSLGDYFVGPGLDLLLQHLSENDPNRYGTPPAPKEAVEALPTVKINENLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRSQLRVDEAKQDSDASRNLRNQRGDGNIGHANTNAEGDSEGRTPSGGRRFSFPWPFNGLFSSSSSSSNANGNGTQSERN* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2066 357 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 2 339 - -
Mal2g2066 357 MobiDBLite consensus disorder prediction 286 332 - -
Mal2g2066 357 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 205 284 IPR013083 -
Mal2g2066 357 MobiDBLite consensus disorder prediction 338 357 - -
Mal2g2066 357 MobiDBLite consensus disorder prediction 298 318 - -
Mal2g2066 357 Pfam zinc-ribbon 8 39 IPR039525 GO:0061630
Mal2g2066 357 CDD RING-H2_RNF126_like 237 279 - -
Mal2g2066 357 ProSiteProfiles Zinc finger RING-type profile. 238 279 IPR001841 -
Mal2g2066 357 SUPERFAMILY RING/U-box 227 285 - -
Mal2g2066 357 Pfam Ring finger domain 237 279 IPR001841 -
Mal2g2066 357 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 2 339 - -
Mal2g2066 357 SMART ring_2 238 278 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2066 Mal-Chr2 25394412 25395485 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2066 135 305 C3H Transcription Factor Family AT1G26800 35.838 5.93e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2066 K11982 - gmx:100784876 469.929