Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2063 ATGAGGAATCCTTCATCATCATCAACAGAAACAACAACAACCAAAAATTCAAACAAAAAGCAGCAGAAGAAGAAGAACAACAACAGTAGTACTGGCAATGGGAGCAGCACTACTACTCCTTGTTGCAGCAAAGTAGGGTTGAAGAGAGGGCCATGGACATCAGAAGAAGATGAAGTGTTATCAGAATACATCAACAAAGAAGGTGAAGGTCGTTGGAGAACTCTCCCCAAACGTGCTGGTCTTCTCCGTTGTGGCAAAAGTTGTCGCCTCCGTTGGATGAATTATCTTCGCCCATCCGTCAAACGCGGTCAGATCGCACCTGATGAAGAAGATCTCATCCTCCGCCTCCACCGTCTCCTCGGCAACAGGTGGTCATTGATAGCTGGGAGAATTCCAGGAAGAACTGATAATGAGATAAAGAATTATTGGAACACACATCTCAGCAAGAAACTTATTAACCAAGGGATTGATCCAAGAACTCATAAACCTCTTAATAATAATAATAACCCATCTTCTTCAATAATCCCAAATACTAATCACCAAACCACTCCTTTTATATCTTCAGATCCTCCTAATCATCTTCAACTTCATCCAATTACTCCTAACAATGAATCTGAGTATCCCTCTCATCATTTAGCTCAAGATCATAATAATCATTATTCACCACAACAAGCTCAGGATTGTGATAACCTTGGTTATGCAATGGTTAATAATCAGCTGATTAACGGCAACAGCAACAATAACAAAGGGGATTATGACGACAGTACTAATAACAATTACGGTTGTGATGATGTGTTTACTTCATTCTTGGATTCATTGATCAACGACGATGCATTTGCTGCACACAGATCAGAGAATGATCCTTTGATCTCATCTGCTGCAACACCACCGGTGTTGTGGGAATCGCCACTCATCATGTCTACAAGTAATTTCACCCAAAACCAAGATGGGAAAGCTTCATGA 963 0.4091 MRNPSSSSTETTTTKNSNKKQQKKKNNNSSTGNGSSTTTPCCSKVGLKRGPWTSEEDEVLSEYINKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDPRTHKPLNNNNNPSSSIIPNTNHQTTPFISSDPPNHLQLHPITPNNESEYPSHHLAQDHNNHYSPQQAQDCDNLGYAMVNNQLINGNSNNNKGDYDDSTNNNYGCDDVFTSFLDSLINDDAFAAHRSENDPLISSAATPPVLWESPLIMSTSNFTQNQDGKAS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2063 320 SUPERFAMILY Homeodomain-like 46 143 IPR009057 -
Mal2g2063 320 ProSiteProfiles Myb-like domain profile. 97 147 IPR001005 -
Mal2g2063 320 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 32 312 - -
Mal2g2063 320 MobiDBLite consensus disorder prediction 23 43 - -
Mal2g2063 320 Gene3D - 106 174 - -
Mal2g2063 320 MobiDBLite consensus disorder prediction 1 16 - -
Mal2g2063 320 MobiDBLite consensus disorder prediction 159 219 - -
Mal2g2063 320 CDD SANT 107 147 IPR001005 -
Mal2g2063 320 CDD SANT 51 96 IPR001005 -
Mal2g2063 320 ProSiteProfiles Myb-like domain profile. 44 96 IPR001005 -
Mal2g2063 320 PANTHER TRANSCRIPTION REPRESSOR MYB5-LIKE 32 312 - -
Mal2g2063 320 SMART sant 48 98 IPR001005 -
Mal2g2063 320 SMART sant 101 149 IPR001005 -
Mal2g2063 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 96 IPR017930 -
Mal2g2063 320 Pfam Myb-like DNA-binding domain 106 147 IPR001005 -
Mal2g2063 320 Pfam Myb-like DNA-binding domain 49 96 IPR001005 -
Mal2g2063 320 MobiDBLite consensus disorder prediction 157 219 - -
Mal2g2063 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 151 IPR017930 -
Mal2g2063 320 MobiDBLite consensus disorder prediction 1 44 - -
Mal2g2063 320 Gene3D - 49 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2063 Mal-Chr2 25322099 25323213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2063 35 276 MYB Transcription Factor Family AT3G13540 55.785 3.56e-84 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal2g2063 Myb_DNA-binding 6.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2063 K09422 - gmx:100797847 315.079