Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2053 ATGCGATCTTCATGGGCTGATTTGGCTGCAAATTCCGCGGCCGAAAATGCACCACCACCTTCTGCTCCTGCTGCTGCTGCCAACAATGCTGCTAATACTCGACCTGTTTACGTTCCTCCTCATCTGAGGAACCGTGGACCTACAGCACCAGCGCCAGCACCGGCACCTGCTTTTGATAACTCCGGATCGCGTTGGGCACCGCCGCCTAGGAACGATTATCGCAGTGGTGGTGGTGGTCGTGGTGGTGGTTATGGGAACAGAGGTGGTGGTGGTTGGGATCGTCGTGAGGCGAATCCATTTGCAGATCAGGATGATTCTGAGGAGCCTGTGACTCAAGAGGAGCAGGAGAATACAGGGATAAATTTTGATGCTTATGAGGATATTCCGGTGGAGACGAGTGGTGGGAATGTTCCTCCGCCGGTGAATACTTTTGCTGAGATTGATTTGGGTGATGCGCTTAATCAGAATATTAGGCGATGTAAGTATGTGAAGCCGACGCCTGTTCAGAGGCATGCAATACCGATATCGCTTGCTGGAAGGGATTTGATGGCGTGTGCGCAGACCGGTTCTGGGAAGACTGCTGCTTTTTGTTTTCCAATTATCAGTGGAATTATGACGGGGCAGCCTGCTCAGAGGCCGCCTCGTGGGGTGCGCACCGTGTGTCCGCTTGCCCTTGTTCTCTCCCCGACTAGGGAGCTATCGATGCAGATACACGAAGAGGCTAGGAAGTTTTCGTACCAGACAGGGGTTAGGGTGGTTGTTGCTTATGGTGGTGCTCCAATAAACCAGCAGCTACGAGAGCTTGAGAGAGGGGTGGACATTCTTGTCGCAACTCCAGGAAGACTGGTAGATTTATTGGAGAGAGCCAGGGTTTCACTGTCGATGATTAGGTATCTGGCCTTAGATGAGGCAGATAGGATGTTGGATATGGGTTTTGAGCCACAGATTAGAAAGATTGTTGAACAAATGGACATGCCTCCAGCTGGTTTCAGACAGACTATGCTGTTCAGTGCTACTTTTCCGAAAGAGATACAGAGACTAGCCTCTGATTTCCTTTCAAATTATATTTTTCTGGCTGTTGGAAGAGTGGGATCAAGTACTGATTTAATTGACCAAAGAGTTGAGTACGTTCAAGAGTCTGACAAGAGAAGCCATCTCATGGACCTTCTTCATGCACAGAGAGCAAACGGTGTACAAGGAAAGCAAGCTTTGACTTTAGTTTTTGTGGAGACAAAGAAAGGAGCTGATGCACTGGAACACTGGTTGTGTCTTAATAATTTTCCAGCAACTACTATTCACGGTGACAGGACACAACAGGAAAGAGAGGCAGCATTACGATCTTTTAAAAGTGGCAACACCCCCATATTGGTTGCCACTGATGTGGCTGCACGTGGTCTTGATATTCCGCACGTTGCGCATGTAGTTAACTTTGACCTTCCCAATGATATTGATGATTATGTGCACCGTATTGGAAGGACTGGGAGAGCAGGAAAGAAAGGTCTTGCAACTGCGTTCTTTAATGAAAACAATACATCCATAGCAAGGTCTCTACAAGATTTGATGCAAGAAGCAAATCAAGAAGTACCTGCTTGGCTCTCGCGGTTTGCTGCACGATCATCCTTTGGTGGAGGAAAGAACCGTCGCTCCGGAGGCCGATTTGGTGGCCGTGACTTTCGAAGAGAAGGTTCTTTTAGTAGGGGTGGTTCTGATTACCATGGTGCAGGAAATAGCAGTGGTGGATATGGTGGGGCTTCTGGTGGGTATGGTGGAGGATATGGTGGGTATGCAGGAAATAGCGGCGGTCCTGGGGTGACTAGTGCATGGGACTGA 1830 0.4896 MRSSWADLAANSAAENAPPPSAPAAAANNAANTRPVYVPPHLRNRGPTAPAPAPAPAFDNSGSRWAPPPRNDYRSGGGGRGGGYGNRGGGGWDRREANPFADQDDSEEPVTQEEQENTGINFDAYEDIPVETSGGNVPPPVNTFAEIDLGDALNQNIRRCKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRGVRTVCPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGFRQTMLFSATFPKEIQRLASDFLSNYIFLAVGRVGSSTDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRTQQEREAALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSIARSLQDLMQEANQEVPAWLSRFAARSSFGGGKNRRSGGRFGGRDFRREGSFSRGGSDYHGAGNSSGGYGGASGGYGGGYGGYAGNSGGPGVTSAWD* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2053 609 CDD DEADc_DDX3_DDX4 143 364 IPR044763 GO:0003724|GO:0005524
Mal2g2053 609 CDD SF2_C_DEAD 370 506 - -
Mal2g2053 609 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 369 536 IPR001650 -
Mal2g2053 609 Pfam DEAD/DEAH box helicase 166 347 IPR011545 GO:0003676|GO:0005524
Mal2g2053 609 SMART helicmild6 416 497 IPR001650 -
Mal2g2053 609 Gene3D - 361 540 IPR027417 -
Mal2g2053 609 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 142 170 IPR014014 GO:0003724
Mal2g2053 609 MobiDBLite consensus disorder prediction 1 119 - -
Mal2g2053 609 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 46 573 - -
Mal2g2053 609 Gene3D - 97 360 IPR027417 -
Mal2g2053 609 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 223 514 IPR027417 -
Mal2g2053 609 Pfam Helicase conserved C-terminal domain 382 497 IPR001650 -
Mal2g2053 609 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 173 358 IPR014001 -
Mal2g2053 609 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE-LIKE PROTEIN 46 573 - -
Mal2g2053 609 SMART ultradead3 161 373 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2053 Mal-Chr2 25209722 25215382 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2053 131 529 Eukaryotic Initiation Factors Gene Family AT3G19760 32.500 1.83e-64 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2053 K11594 - gmx:100795756 898.271