Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2036 ATGGCTTTCTGTAACAAGATTGGAAACCTCTTGAGGCAAGGTGCTACTCAGAGCACCCAAGCTCCTGTTTCATCCATGCTTAACTACTTGCGCCATATGTCCTCGAGCAAGCTTTTCATTGGAGGCCTTTCTTATGGAGTTGATGACCAGTCTCTTAGGGATGCATTTGCAAACTATGGAGAGGTGGTTGAGGCAAGAGTTATCACTGACAGAGACACTGGAAGATCAAGGGGATTTGGATTTGTCAACTTCACCAGTGAAGAGTCTGCAACTTCAGCACTCGCTATGGATGGACAGGATTTGAATGGGCGAAGCATTCGCGTGAACTATGCAAATGATAGACAGGGTGGACCTCGTGCTGGAGGCGGCGGTGGATACAGTGGCGGTGGTGGTGGATATGGTGGCGGTGGCGGTGGATATGGTGGTGGTGGCGGTGGATATGGTGGCGGTTGGTGA 456 0.5066 MAFCNKIGNLLRQGATQSTQAPVSSMLNYLRHMSSSKLFIGGLSYGVDDQSLRDAFANYGEVVEARVITDRDTGRSRGFGFVNFTSEESATSALAMDGQDLNGRSIRVNYANDRQGGPRAGGGGGYSGGGGGYGGGGGGYGGGGGGYGGGW* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2036 151 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 113 IPR000504 GO:0003723
Mal2g2036 151 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3 MITOCHONDRIAL 1 150 - -
Mal2g2036 151 SUPERFAMILY RNA-binding domain, RBD 25 145 IPR035979 GO:0003676
Mal2g2036 151 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 107 IPR000504 GO:0003723
Mal2g2036 151 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 1 150 - -
Mal2g2036 151 Gene3D - 14 149 IPR012677 -
Mal2g2036 151 SMART rrm1_1 37 109 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2036 Mal-Chr2 25057536 25058831 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2036 9 116 C2H2 Transcription Factor Family AT2G19380 28.704 1.87e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2036 - - gmx:100527220 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2036 2 25057536 25058831 Mal2g2036 2 25057536 25058831 ECH