Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2021 ATGCAAGAAATCAACGCGCATGTTTTGTACTTGTCGTTAAAGAGACATAGTAAAAGTCAACTGTGTGCAAGGACCGGAAATTCTAGTTATGTTTTAAGAGACATATTCTTTTTACATACCAGATGGTTGATGATTGTTTCATGGAGTCACACCAACAACAGTTTCATCGTATGGAACCCCACTGAATTTGCTCGTCTTCTTCTTCGAAATTATTTCAAACACAACAATTTCTCTAGCTTCATTCGTCAGCTTAATACTTATGGATTTCGTAAAATACATCATGAGCAATGGGAGTTCGCTAATGAATATTTTGTGAAAGATCAAAAGCATCTTCTTAATAACATTCACCGCAAGAAACCTATTCACACTCACAATCCTTCTCCAAGCTCTCTTGTAGATCCAGAGAGATCAGCATTTGGGCAAGAAATAGAGAAACTTTCACATGAAAAAACTACTATTGAATCCAATATTTCTAGCTTCAAGAAACACATATCAGCTACAAAGTTTCATGTGGAAAATCTTCAACCGAGATTAGATGGTATGGAGAAGAGGCAAAAGAACTTGCTGAACTTGTTTGAAAGGGAACTTTCAGAATCCTACATTTATTTCTCGAATAAACTAAACTTGATATCACCTACTAGTTCAAAATCAAATGCAGATGGAGAAAGTCCGAATAATAAGATGTTGTGTGAAGGAGAATTACCAAAAGAAGTGCAGACAATAACAACTCTTGGATTTGGATCCAACAAAGAGAGTAGTTTGCTCTCGTACTCTCCTTCAATCGATCCTATCTCAGGTACACAATTATTGATCTATCTTTTCATCTATTTTAATTTGTATCTACGATAA 849 0.3522 MQEINAHVLYLSLKRHSKSQLCARTGNSSYVLRDIFFLHTRWLMIVSWSHTNNSFIVWNPTEFARLLLRNYFKHNNFSSFIRQLNTYGFRKIHHEQWEFANEYFVKDQKHLLNNIHRKKPIHTHNPSPSSLVDPERSAFGQEIEKLSHEKTTIESNISSFKKHISATKFHVENLQPRLDGMEKRQKNLLNLFERELSESYIYFSNKLNLISPTSSKSNADGESPNNKMLCEGELPKEVQTITTLGFGSNKESSLLSYSPSIDPISGTQLLIYLFIYFNLYLR* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2021 282 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-5 45 200 - -
Mal2g2021 282 ProSitePatterns HSF-type DNA-binding domain signature. 68 92 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal2g2021 282 PRINTS Heat shock factor (HSF) domain signature 67 79 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal2g2021 282 PRINTS Heat shock factor (HSF) domain signature 80 92 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal2g2021 282 SUPERFAMILY "Winged helix" DNA-binding domain 45 118 IPR036390 -
Mal2g2021 282 Gene3D - 32 119 IPR036388 -
Mal2g2021 282 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 45 200 IPR027725 -
Mal2g2021 282 Pfam HSF-type DNA-binding 44 118 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal2g2021 282 SMART hsfneu3 37 118 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2021 Mal-Chr2 24932444 24938710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2021 45 193 HSF AT4G13980 59.732 1.25e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mal2g2021 HSF_DNA-bind 1.2e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2021 K09419 - gmx:100816484 231.106