Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2001 ATGGTTTCAATTTCAATCCTCAAATTCCGTAGAATCTTCTACACAATAGAAGTCACTGGCATACAAACATATGTTGCCTTGAGACGACACTGTCATTCTTGGGGTCACACCAGGATTTTGGATAAAACTTCGATCTCGGCACCAAATGAGGAGCTATGTAGGGTGGGACTTTTCTGGGACTTAGACAACAAACCACCCAATTCAATCCCACCTTATGAAGTTGCCAATAAGCTTAGAATAGCTGCAGCTTCCTTTGGGGTTGTTCGTCACATGATTGCTTATGCAAATAGCCACACTTTTAGCAATGTTCCCCATGTTGTTCGCGAGAGGAGGAAAGAACGGGAACTGTTGTATCGTTTGGAGGATAAGGGTGTGATTAAGCGTAATGAGCCTCATCTTTGTCGTGTTTGCGGGAGGAAATTTTGGACGAATGAAAAGCTTGTTAATCATTTCAAGGAATTGCATGAGCGTGAGCATGCGAAAAGGGTGAATCAGATAGAGTCGGCTAGAGGGAGTAGGAAGGTGAAATTGGTGGGTAAGTATGCTATGAAAATGGAAAAATATAAGAAGGCTGCAAGTGCTGTTTTGACTCCGAAAGTTGGGTATGGTTTGGCTGATGAGCTGAAACGGGCAGGGTTTTGGGTTCAAACTGTGCTGGATAGGCCGCAAGCTGCGGATATTGCGTTGCAAAAGCATATGGTGGATATGATGGATCATAGGCGGGTTGAGTGCTTGGTTCTTGTATCGGATGATTCTGATTTTGTTGATGTGATAAAGGAAGCAAAGCTGCGATGTCTGAAGACTGTTGTTATTGGGGATTTTAGTAGTGAAGGAGTTTTGAAGAGGACTGCCGATACTGCTTTTTCTTGGGAAGAAATTTTGATGGGGAAGGCAAAGAAGGAGGCTGTATCTGTTGTGGAAAACTGGAACGATCGTGATATATTGAAAAGGTTGGAGTGGACATACAGTCCGGACGTGGATAAAAAAAAACTCAACCGGGATGATACAGTTGCTGAAACATCTGGAAATGATGATGATATTGAATTTATCTGTGATGATATTGATGATGACTACAAGGATGACAAAGGTCCTTGGTGGAAATTAGACTCCGATGATAACAATGTTGCAAATTGA 1134 0.4242 MVSISILKFRRIFYTIEVTGIQTYVALRRHCHSWGHTRILDKTSISAPNEELCRVGLFWDLDNKPPNSIPPYEVANKLRIAAASFGVVRHMIAYANSHTFSNVPHVVRERRKERELLYRLEDKGVIKRNEPHLCRVCGRKFWTNEKLVNHFKELHEREHAKRVNQIESARGSRKVKLVGKYAMKMEKYKKAASAVLTPKVGYGLADELKRAGFWVQTVLDRPQAADIALQKHMVDMMDHRRVECLVLVSDDSDFVDVIKEAKLRCLKTVVIGDFSSEGVLKRTADTAFSWEEILMGKAKKEAVSVVENWNDRDILKRLEWTYSPDVDKKKLNRDDTVAETSGNDDDIEFICDDIDDDYKDDKGPWWKLDSDDNNVAN* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2001 377 PANTHER - 22 375 - -
Mal2g2001 377 CDD PIN_LabA-like 143 273 - -
Mal2g2001 377 ProSitePatterns Zinc finger C2H2 type domain signature. 134 155 IPR013087 -
Mal2g2001 377 Pfam NYN domain 204 288 IPR021139 GO:0004540
Mal2g2001 377 Gene3D - 49 295 - -
Mal2g2001 377 ProSiteProfiles Zinc finger C2H2 type domain profile. 132 160 IPR013087 -
Mal2g2001 377 PANTHER ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN 22 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2001 Mal-Chr2 24528194 24529327 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2001 54 373 C2H2 Transcription Factor Family AT4G12240 59.062 2.62e-133 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2001 - - lja:Lj3g3v3326020.1 525.013