Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1987 ATGCTACCTGGTTTGCAATACAATATCAATGATCTGTTTCAAGAAGCTAAGAAAAGATGGCTCAAGCCTATAGAAGTGCTTTACATTTTGCAGAATCACGATACCTGCGAGTTCACCGATTTTCCCCTTAAACAGCCTCATGGTGGATCTTTGTATCTGTTTAATAGAAGAGTCATGCGTTTCTTTCGAAAAGATGGTCATAATTGGCGGAAGAAAAAAGATGGAAAAACTGTTTCGGAAGCGCACGAACGGCTTAAGGTTGGAAATGTTGAAGCCCTAAACTGCTACTATGCACATGGAGAGGAGAACCGCAGTTTCCAGAGGCGAAGTTATTGGATGTTGAACCCGGAATATGAGCATGTTGTTCTTGTTCATTACAGAGAAACAAATGAGGGGACATCCACTTCTGGTCCTATCACACAATCGTCGCCATTTAGTCAGAGTCGTAGCTCATATACTACTCCAAACCCTGAGACAACATCCATATTTGGTGATTCATGTGAGCCTAATCAGAATTTCTCCAGTCCTGGGTTCTTAGAAGTCACCTCTGATATAGTCATTTTAAATAATGGAACGGATCACTTGGAGAAAACAAATACTCAAGCGCTGCGCCATTTGGAGGAACAGTTAAGTTTGAATGAGGACAGCTTAACAGAAATTCCTCCCTTTTATAGTGAGCATGAAATTCCTGTTGCGTTCTCTGGACCAGATGATTATAAACAACCATATGATGGATATAACGGAACAAAAGATGGCAGTGGTAATCGTTATCATGAATTAGTTGACCATGATTGCCCTGGTGGGCATGAAAAAACCTTATCTTGGACAGAGATGCTGGAATCATGCAAGTCCTCATTTGTGAATAAGTTACCAGAACAACATGCGTACAATGCATTTGAAAATGAAAAGCCTCTATCTTCTCTAGGAAGAGAAATGATTGCCAACCAGGAAATCAGTTACCAGATACACCCCAACATCAATAATGATGAGCACTCATACTTTTTATTTCCTCAAGACACTGGTGGAGTCCAATTTTCTCCATATTCTTCAGTAGAAACTCAAGGAACTAATTCTGATTACTATCAAACATTGTTTGATCAAAGCCAATTTCAAGAACCTCTGGATGCATATTCAAGCTTGACTGGTGGCCAGAAACAGAAATTTACAATTACGGCTGTCTCCCCAGAATATTGTTATGCCAATGAGGCAACAAAGGTGATCATTGTTGGATCCTTTCTCTGCCTTCCCTCGGATTCTACCTGGGCTTGTATGTTTGGTGACGTTGAAGTTCCTGCTGAAATAATTCAGGATGGCGTAATCTGTTGCGAGGCTCTGTCCCATCTTACTGGAAAGGTTGCTCTGTGCATTACTTCAGGAAATAAGGAACCATGCAGTGAAATCAAAGAGTTTGAGTTTCGTAATAAGATCAACAGTTGCACTCGCTGTAATATTTTGGAAACAGAAGTTGCCAATAGTCCAGAAGAGCTGTTATTACTTGTTCGATTTGCAGAAATGCTCCTCTCTGCTTCGACTATAAAGGATGACAACTCAGAATCTGGAAGTCAATTTTCAACAGAACAGAAAGCAGATGATGATTCATGGAGCCATATTATAGACGCTCTCCTAGTTGGCAATGTTAGTTCATCGGGTACTATTGATTGGCTTCTTCAAGAGCTGCTGAAGGATAAGCTGCAGAACTGGCTTTCTTGCCAATCCAAAGAACGAGATGAAGGGGTAGGTTGTTCTTTGTCCAAGAAAGAGCAAGGGATTATACACATGGTTTCTGGATTGGGTTTTGAGTGGGCCCTGAGCCCCATCCTCAGTTGTGGAGTGAATGTTAATTTCCGTGATATCAATGGATGGACTGCCCTTCATTGGGCTGCACGGTTTGGAAGGTTAAAAATGGTTGCTTCACTTATAGCTGCTGGTGCATCAGCTGGAGCAGTGACAGATCCAAGTTCACAAGATCCAAATGGTAAAACTGCTGCATCTATTGCGGCCAGCAATAGCCACAAGGGACTGGCCGGTTATCTTGCAGAAGTAGATCTAACAAGTCATCTGTCATCCCTCACATTGGAAAAATGTGAAGTTCCTAAAGATTCTTCTGACCTTGAAGCTGAGTTAACTGTCAGCAGTGTGTCTAAGAAAAATCTTGAAGCCAGTGATGATGAGGATTCACTAAAAAATACCTTGGGTGCTGTCAGAAATGCAGCTCAGGCAGCTGCACGGATACAGGCTGCTTTCCGTGCACATTCTTTCAGAAAACGGATGGAGAGAGAAGCTGCCTCCACCACTTGTCTAAACGGATATGTCACCGGTGTTAGGAGCTCACGTGATTACAATTCAGCTGCCTTATCAATTCAGAAGAAATATAGAGGCTGGAAAGTTCGCAAAGTGTACTTAGCTTTGCGCCAAAAAGTTGTAAAGATACAGGCTCATGTGAGGGGTTACCAGGCTCGGAGGCAATACAAGCTAATGATATGGGCAGTTGGAATCTTGGACAAGGTTGTGCTAAGATGGCGGAGAAAACGTGGTGGTTTGCGAAGTTCTCCACAAGAAATAGATTCAAAAGAAGAAAGTGATGATGAAGATTTTCTCAAGGTGTTCAGGCAAGAGAAAGTACATGCAGCAATTGAAAAGGCTTTGGCAAGGGTGGTTTCCATGGTCCCTTCTGCGCATGCTCGTCGGCAATATAATCGCATGCTTGAGATGTATCGTCAAGCCAAGGCTGAACATGACAACACGAGTGATGAAACACTGTTATCAACTTCTGTAGCGGATGCTTGGAATATTGAAGATGATGATTTATGTCAATTTCCTTGGGAAATGCTCTAG 2835 0.4222 MLPGLQYNINDLFQEAKKRWLKPIEVLYILQNHDTCEFTDFPLKQPHGGSLYLFNRRVMRFFRKDGHNWRKKKDGKTVSEAHERLKVGNVEALNCYYAHGEENRSFQRRSYWMLNPEYEHVVLVHYRETNEGTSTSGPITQSSPFSQSRSSYTTPNPETTSIFGDSCEPNQNFSSPGFLEVTSDIVILNNGTDHLEKTNTQALRHLEEQLSLNEDSLTEIPPFYSEHEIPVAFSGPDDYKQPYDGYNGTKDGSGNRYHELVDHDCPGGHEKTLSWTEMLESCKSSFVNKLPEQHAYNAFENEKPLSSLGREMIANQEISYQIHPNINNDEHSYFLFPQDTGGVQFSPYSSVETQGTNSDYYQTLFDQSQFQEPLDAYSSLTGGQKQKFTITAVSPEYCYANEATKVIIVGSFLCLPSDSTWACMFGDVEVPAEIIQDGVICCEALSHLTGKVALCITSGNKEPCSEIKEFEFRNKINSCTRCNILETEVANSPEELLLLVRFAEMLLSASTIKDDNSESGSQFSTEQKADDDSWSHIIDALLVGNVSSSGTIDWLLQELLKDKLQNWLSCQSKERDEGVGCSLSKKEQGIIHMVSGLGFEWALSPILSCGVNVNFRDINGWTALHWAARFGRLKMVASLIAAGASAGAVTDPSSQDPNGKTAASIAASNSHKGLAGYLAEVDLTSHLSSLTLEKCEVPKDSSDLEAELTVSSVSKKNLEASDDEDSLKNTLGAVRNAAQAAARIQAAFRAHSFRKRMEREAASTTCLNGYVTGVRSSRDYNSAALSIQKKYRGWKVRKVYLALRQKVVKIQAHVRGYQARRQYKLMIWAVGILDKVVLRWRRKRGGLRSSPQEIDSKEESDDEDFLKVFRQEKVHAAIEKALARVVSMVPSAHARRQYNRMLEMYRQAKAEHDNTSDETLLSTSVADAWNIEDDDLCQFPWEML* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1987 944 SMART ANK_2a 658 687 IPR002110 GO:0005515
Mal2g1987 944 SMART ANK_2a 619 648 IPR002110 GO:0005515
Mal2g1987 944 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Mal2g1987 944 ProSiteProfiles IQ motif profile. 737 765 IPR000048 GO:0005515
Mal2g1987 944 Coils Coil 898 918 - -
Mal2g1987 944 Gene3D - 497 692 IPR036770 -
Mal2g1987 944 Gene3D Immunoglobulins 382 476 IPR013783 -
Mal2g1987 944 SUPERFAMILY E set domains 389 473 IPR014756 -
Mal2g1987 944 Gene3D - 777 827 - -
Mal2g1987 944 Pfam IQ calmodulin-binding motif 805 824 IPR000048 GO:0005515
Mal2g1987 944 Pfam IQ calmodulin-binding motif 782 800 IPR000048 GO:0005515
Mal2g1987 944 Pfam IPT/TIG domain 389 467 IPR002909 -
Mal2g1987 944 ProSiteProfiles Ankyrin repeat profile. 619 651 IPR002110 GO:0005515
Mal2g1987 944 MobiDBLite consensus disorder prediction 131 159 - -
Mal2g1987 944 CDD IPT 389 473 - -
Mal2g1987 944 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 737 831 IPR027417 -
Mal2g1987 944 Pfam Ankyrin repeats (3 copies) 607 680 IPR002110 GO:0005515
Mal2g1987 944 SMART CG_1_2 12 130 IPR005559 GO:0003677
Mal2g1987 944 ProSiteProfiles IQ motif profile. 803 827 IPR000048 GO:0005515
Mal2g1987 944 ProSiteProfiles Ankyrin repeat region circular profile. 619 645 - -
Mal2g1987 944 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 939 - -
Mal2g1987 944 SUPERFAMILY Ankyrin repeat 590 680 IPR036770 -
Mal2g1987 944 PANTHER CALMODULIN-BINDING PROTEIN 1 939 - -
Mal2g1987 944 ProSiteProfiles IQ motif profile. 780 809 IPR000048 GO:0005515
Mal2g1987 944 SMART iq_5 802 824 IPR000048 GO:0005515
Mal2g1987 944 SMART iq_5 779 801 IPR000048 GO:0005515
Mal2g1987 944 SMART iq_5 736 758 IPR000048 GO:0005515
Mal2g1987 944 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1987 Mal-Chr2 24168728 24177903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1987 5 940 CAMTA Transcription Factor Family AT1G67310 49.060 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mal2g1987 CG-1 8e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1987 K21596 - gmx:100791430 1265.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1987 2 24168728 24177903 Mal2g1987 2 24168728 24177903 ECH