Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1966 ATGGTTATGGCGGAGGAAGAAGAGAAAACGGTGTCGTCTGAACCGGAATTCCCAAAGAGTAGAGTGAAGAAGATAATGACACTGGACAAAGACGTGAAGAGGGTGAGTTCAGAAGCGTTGTTCTTGGTCTCACGATCTACTGAGCTTTTCTTACAGTTACTTGCTGAAAAATCTGCGGAAGTTGCAATTGAGAAGAAGCGCAAGACTGTGAAGCTTGAACACATAAGAATCGCGGTGAAGAGGAATCGGCCAATAAGTGATTTTCTTCTTGATTCGCTTCCGATGCCTTCTGAAACTGCGAAATCTGATAAACCGGTGCCGGTTGCTGATCGGCCTAAATCTGCTCCGGTGGGTACTCGCCGCATTGATGAAATCTTCCGAAAGTCTGAAGCCCAAGTTGAAGCTCAAGCGCCAGCGCCGGAACCTGAACCGCCAGCGCCGGAACCTGAACCCGAGCCGGAACCAATGGAGGAATCCTAG 480 0.4917 MVMAEEEEKTVSSEPEFPKSRVKKIMTLDKDVKRVSSEALFLVSRSTELFLQLLAEKSAEVAIEKKRKTVKLEHIRIAVKRNRPISDFLLDSLPMPSETAKSDKPVPVADRPKSAPVGTRRIDEIFRKSEAQVEAQAPAPEPEPPAPEPEPEPEPMEES* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1966 159 PANTHER NUCLEAR FACTOR Y, SUBUNIT C13 5 130 - -
Mal2g1966 159 MobiDBLite consensus disorder prediction 116 130 - -
Mal2g1966 159 Gene3D Histone, subunit A 1 95 IPR009072 GO:0046982
Mal2g1966 159 MobiDBLite consensus disorder prediction 88 159 - -
Mal2g1966 159 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 5 130 - -
Mal2g1966 159 SUPERFAMILY Histone-fold 14 82 IPR009072 GO:0046982
Mal2g1966 159 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 16 79 IPR003958 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1966 5 135 CCAAT-HAP5 Transcription Factor Family AT5G43250 55.882 4.74e-46 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mal2g1966 CBFD_NFYB_HMF 3.5e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1966 - - gmx:100790556 177.948