Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1950 ATGATGGATGTTTCTGAGGTTGAAGAAAATTTCTTTGCAGCAAGCGATGCCAAGTTACATGCAGAAATGTGCAGAAATCTTTCTGCAATACATTGTAAAATATTGTCATTATTTCCTTCTTTAGAAGCAGCTAGGCCAAGGAGCAAATCAGGAATTCAGGCATTATGTTCACTGCATGTAGCCTTAGAGAAGGCGAAGAATGTACTTAAGCATTGCTCAGAGTCTAGTAAACTTTACTTGGCTATAACTGGGGATTCTGTTCTTCTAAAATTTGAGAAGGCCAAGTGTGCTCTTGTAGATAGTCTTAAGCTGGTGGAAGATATTGTTTCCCAATCCATTGGATTTCAGATTGATGAAATTGTGAACGAAATTGCGGGTATGGTATTCGCGCTTGATCCATCCGAGAAGCAAGTTGGGGATGACTTAATTGCATTGCTTCAGCAGGATAGAAAGTTTAACAACTCTAATGACAGCAGTGAACTTGAGTGTTTTCATATGGCTGCTACTAGACTTGGAATCACGTCTTCCAGAGCAGCTCTCACCGAAAGAAGAGCTTTAAAAAAACTCATTGAAAGGGCTCGGGCCGAGGAAGACAAGAGGAAGGAATCAATTATTGCATATCTATTACACCTTATGAGGAAATACTCCAAGTTATTTAGAAGTGAGTTCTCTGACGATAATGATTCTCAGGGTTCTCAACCTTGTTCTCCCACTGTTCAGAGACCTCTCGAGGACGGTGTTCCTGGTGGTCATTGTCAAGCCTTTGATAGACAAATATCAAAACTTGGTTCTTTCAATTTTAAGCCGAACAATAAGAAATCAGGTCAAATGCCCCTTCCACCAGAAGAGTTAAGGTGTCCAATCTCTCTGCAACTTATGAGCGATCCTGTTATAATTGCGTCTGGGCAGACATATGAAAGAGCTTGTATAGAAAAATGGTTCAACGATGGCCACAACACCTGCCCAAAGACTCAACAGAAACTTGCACATCTTTCTTTGACTCCTAATTACTGTGTCAAGGGTCTTGTGGCTAGTTGGTGTGAACAGAATGGAATTCCTATTCCCGAAGGCCCTCCCCAATCTCTTGATTTTAACTACTGGAGATTGGCATTATCAGATTCCGAATCCACAAATTCAAGATCTGTAAACAGTGTCAACTCTTGCAAATTGAAGGGTGTCAAAGTTGTTCCACTTGAAGAAAATGGTATCTTAGAGCAATCTGAGGGAAATGTAATTGAAAGTTTCTCTGCACAAGAAGAGGAAGACAGTGAGAAGTATCTTAGTCTTCTGAAAGTATTGACCGAAGGGAACAATTGGAAAAGGAAGTGTAAAGTAGTAGAGCGGTTAAGACTCTTGCTGCGGGATGATGAGGAAGCCAGGATTTTTATGGGGGCTAATGGATTTGTGGAAGCACTTTTTCAGTTTCTGCAATCAGCTGTACATGAAGGGAATGCGTTGGCTCAAGAAAATGGAGCTATGGCTCTGTTCAACCTGGCCGTGAATAACAACAGAAATAAAGAACTTATGCTATCAGTCGGAATCTTATCGTTGTTGGAGGAAATGATTTCAAGCTCCAGTTCGTACGGTTGTGCAACCGCGCTGTATCTGAATCTTTCTTGCCTTGAAGAAGCCAAACAAATTATTGGCGCGAGTCAGGCCGTTCAGTTCCTAATCCAGATGCTTCAAACTAAGACGGAGGTCCAGTGCAAGCTAGATGCCCTTCATGCACTCTATAATATCTCTACTGTATCCTCAAATATTTCAAACCTCCTTTCATCTGGCATTATCAATGGCCTACAATCCCTTCTTGTAAGCCAAGCTGATTGCACATGGACAGAAAAATGCATAGCCGTTTTGGTTAATTTGGCGGTTTCTCATGTAGGAAGAGAGGAAATGATATTGAATCCCGAACTGATAAGCACATTGGCTTCTATACTCGATACTGGTGAATCCATAGAGCAGGAACAAGCTGTTTCATGCCTCCTAATATTATGCAATAGAAGTGAGAAATGTTGTGAGATGGTCCTGCAAGAAGGCGCTATACCTGCATTGGTGTCAATATCGGTAAATGGTACCTCAAGAGGAAGAGAAAAAGCTCAGAAACTCTTGATGCTCTTTAGAGAGCAGCGACAGCGAGACCATTCACCTGCTAATACTCAACACTGCTCACCTGAAGCTGGTGATTTGTCCATGCCTCCTCAAGAAGCGAAACCGTTATGTAAATCGATATCTAGAAGAAAAGTGGGGAAAGCTCTTAGTTTTCTATGGAAAAGCAAAAGCTATTCTGTTTACCAGTGTTAG 2301 0.4146 MMDVSEVEENFFAASDAKLHAEMCRNLSAIHCKILSLFPSLEAARPRSKSGIQALCSLHVALEKAKNVLKHCSESSKLYLAITGDSVLLKFEKAKCALVDSLKLVEDIVSQSIGFQIDEIVNEIAGMVFALDPSEKQVGDDLIALLQQDRKFNNSNDSSELECFHMAATRLGITSSRAALTERRALKKLIERARAEEDKRKESIIAYLLHLMRKYSKLFRSEFSDDNDSQGSQPCSPTVQRPLEDGVPGGHCQAFDRQISKLGSFNFKPNNKKSGQMPLPPEELRCPISLQLMSDPVIIASGQTYERACIEKWFNDGHNTCPKTQQKLAHLSLTPNYCVKGLVASWCEQNGIPIPEGPPQSLDFNYWRLALSDSESTNSRSVNSVNSCKLKGVKVVPLEENGILEQSEGNVIESFSAQEEEDSEKYLSLLKVLTEGNNWKRKCKVVERLRLLLRDDEEARIFMGANGFVEALFQFLQSAVHEGNALAQENGAMALFNLAVNNNRNKELMLSVGILSLLEEMISSSSSYGCATALYLNLSCLEEAKQIIGASQAVQFLIQMLQTKTEVQCKLDALHALYNISTVSSNISNLLSSGIINGLQSLLVSQADCTWTEKCIAVLVNLAVSHVGREEMILNPELISTLASILDTGESIEQEQAVSCLLILCNRSEKCCEMVLQEGAIPALVSISVNGTSRGREKAQKLLMLFREQRQRDHSPANTQHCSPEAGDLSMPPQEAKPLCKSISRRKVGKALSFLWKSKSYSVYQC* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1950 766 SMART Ubox_2 283 346 IPR003613 GO:0004842|GO:0016567
Mal2g1950 766 SUPERFAMILY RING/U-box 277 355 - -
Mal2g1950 766 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 279 353 IPR013083 -
Mal2g1950 766 MobiDBLite consensus disorder prediction 223 247 - -
Mal2g1950 766 PANTHER U BOX DOMAIN-CONTAINING 2 758 - -
Mal2g1950 766 Pfam U-box domain 281 350 IPR003613 GO:0004842|GO:0016567
Mal2g1950 766 MobiDBLite consensus disorder prediction 711 733 - -
Mal2g1950 766 CDD RING-Ubox_PUB 284 326 IPR045210 -
Mal2g1950 766 Coils Coil 176 196 - -
Mal2g1950 766 Gene3D - 404 721 IPR011989 -
Mal2g1950 766 SUPERFAMILY ARM repeat 429 706 IPR016024 -
Mal2g1950 766 ProSiteProfiles U-box domain profile. 279 353 IPR003613 GO:0004842|GO:0016567
Mal2g1950 766 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 2 758 - -
Mal2g1950 766 MobiDBLite consensus disorder prediction 225 239 - -
Mal2g1950 766 SMART arm_5 541 582 IPR000225 GO:0005515
Mal2g1950 766 SMART arm_5 456 500 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1950 Mal-Chr2 23765278 23769022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1950 2 765 U-box Gene Family AT1G24330 67.266 0.0 1040
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1950 - - gmx:100804344 1232.62