Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1947 ATGATGGTGTTGGTGAATTCTAATGCAGGGTTAAGGAAACAGGTTTTTCCAATAGATTACGAAACAGAGATGTCACAGCGTCTCGTTGATGCAGCTCATCACGGTGACACAGATTCTGCCTTGGAATGTATAGCGAATTCATCGGTGGATGTTAACTTCATTGGAACGGTGATGTTGAAGTCCAAAACTACGGAGATCGTGCTACAAGATGAGTTACCTCATCGAGTAAATTCAGTGTATGAAGAGTTCAAAATTGATGTTACTGCTCTGTTTTTGGCTGCACATTCTGGAAATTTGACGCTAATTCGTAAACTATTGAATGTGGGAGCTAATGTAAATGTGAGATTATTCCGGGGCTATGCTACAACAGCAGCAGTGAGAGAAGGGCATTTGAAAGTATTGGAGGTCCTTATCAATGGTGGGGCATCACAACTTGCATGTGAAGAGGCTTTACTTGAAGCAAGCTATGTGGGACAGGCAAGATTTGCTGAACTACTCATGCAATCCAACATGATACGTCCTCAGGTTGCAATTCATGCCCTTGTCTCTGCTTGTTGTAGAGGCTTCATTGAGGTTGTTGATGTACTCATCAAGCATGGAGTGGATGTTAATGCAATGGATAGGACTCTGCTTCAATCTTCAAAACCATTTCTTCACGCTAATGTTGATTGCAATGCATTATTTGCTGCTGTTGTCAGCAGGCAGATAAATGTTGTTAGACTACTGTTGCAGGTTGGTGTAAGATTAGATATCAAGGTCAAATTAGGAGCTTGGTCTTGGGAAACAGATACAGGAGAAGAATTTCGTGTAGGTGTTGGACTAGCTGAGCCTTATCCAATCACATGGTGTGCTGTAGAATATTTTGAATCCACTGGCACTATACTCCATATGCTTCTCCATCACCTCTCACCTAATAGTTTTCACATTGGAAGAACTCTCTTGCACCACACCATCATGTGTAACAATGAAAGAGCATTAAACACACTTTTAAATAATGCTGTGGATACAGAACTAGCAGTGCAAACTACTGAAGAAACCAATGCACGCCCTATTCACATGGCTGCGCGACTCGGATCATGCAACATTCTTCAGTGTTTGATTAAGGGCAAGTGTAACTTGGACTCACAGACAAAATTTGGTGACACAGCATTGATGATTTGCACAAGGTATAAACATGAGAAGTGTGTAAGAGTTTTAGTATCAGCAGGAGCTGATTTGGGGATGGTAAATTCGTCTGGTCATTGCGCAACTTCAATAGCAAATTTTAATCAGTGGACTAAAGTTTATCAGAAAGCAATTTTGGATATAATTAGAGCTGGAAAAGATGTTAAATCAAGCAATGCATCTAGATTTTCAGCTTTGTTATTTGTCACTCACACCAATAATATAGAGGCTTTGAAAAAACTCATTGAAAACAGGAACATAAATCTAGATGAACAGAATGGGAATGGATTTTCAGCTGCAATGATAGCTTGTGCAGGGAGTAATGTGGAAGCTTTCAAGTTGCTTCTTTATGCTGGAGCTGATGTGACAAATCTTAGAAACAAATGTGGTTTAACAGCTCTTAAACTCATAGACTTGAACCAAAATGGTGAAAATAAGGAAAAATTTCATAAGGTGATGTTTGAATATGCACTTAAAAAGGGATGTTTGAATATTAGTACTTTAACGGAGGCGAATCCTCTTCACCGTGCAGCTTGTTATGGAGACATAAACATTGTTGAAAAATTATTAAAAGAAGGGTATTATGATGTGAATGGTTTTGATGGAAATGAATATACACCATTGATGTTAGCAGCAAGAGAGAGTAATGGAGGAATGTGTGAGATTTTGATATCTTATGGAGCAAAATGTGATATTAAAAATGAGAGGAATGAAACAGCACTTTTACTTGCAAGAGCAAATAACAAAGGAAATGATGCAGAGCGTGTGATAATAGATGAGTTAGCTAGAAGAGTAGTGTTGTGTGGTGCACGTGTGAAGAAACATACAAAATGTGGTAAAGGGTTGCCACATAAGAAACAATTGGTAATGATTGGTGCTGCTGGAATCTTACGTTGGGGGAAATCAAATAAGAGAAATGTTGTTTGTAAAGAGGCTGAGGTTGGACCAAGTGAAAGATTTCGATGGAACCGTAGGAAGAAGTTTGATGTTGATGAGTTAGGAATGTTTCATGTTGTCACTGCAAAAAATAAGGAGGTGCATTTTGTTTGTGAAGGTGGTCTTGAAATGGCTGAGTTATGGGTAAGAGGGATTAGACTATTGACAAGAGAAGCCATTTTTGGTTCTAGAGCTAATACTGGCTGA 2307 0.3893 MMVLVNSNAGLRKQVFPIDYETEMSQRLVDAAHHGDTDSALECIANSSVDVNFIGTVMLKSKTTEIVLQDELPHRVNSVYEEFKIDVTALFLAAHSGNLTLIRKLLNVGANVNVRLFRGYATTAAVREGHLKVLEVLINGGASQLACEEALLEASYVGQARFAELLMQSNMIRPQVAIHALVSACCRGFIEVVDVLIKHGVDVNAMDRTLLQSSKPFLHANVDCNALFAAVVSRQINVVRLLLQVGVRLDIKVKLGAWSWETDTGEEFRVGVGLAEPYPITWCAVEYFESTGTILHMLLHHLSPNSFHIGRTLLHHTIMCNNERALNTLLNNAVDTELAVQTTEETNARPIHMAARLGSCNILQCLIKGKCNLDSQTKFGDTALMICTRYKHEKCVRVLVSAGADLGMVNSSGHCATSIANFNQWTKVYQKAILDIIRAGKDVKSSNASRFSALLFVTHTNNIEALKKLIENRNINLDEQNGNGFSAAMIACAGSNVEAFKLLLYAGADVTNLRNKCGLTALKLIDLNQNGENKEKFHKVMFEYALKKGCLNISTLTEANPLHRAACYGDINIVEKLLKEGYYDVNGFDGNEYTPLMLAARESNGGMCEILISYGAKCDIKNERNETALLLARANNKGNDAERVIIDELARRVVLCGARVKKHTKCGKGLPHKKQLVMIGAAGILRWGKSNKRNVVCKEAEVGPSERFRWNRRKKFDVDELGMFHVVTAKNKEVHFVCEGGLEMAELWVRGIRLLTREAIFGSRANTG* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1947 768 Coils Coil 463 483 - -
Mal2g1947 768 Pfam Ankyrin repeats (3 copies) 541 622 IPR002110 GO:0005515
Mal2g1947 768 Pfam Ankyrin repeats (3 copies) 348 408 IPR002110 GO:0005515
Mal2g1947 768 ProSiteProfiles Ankyrin repeat profile. 180 208 IPR002110 GO:0005515
Mal2g1947 768 ProSiteProfiles Ankyrin repeat profile. 483 515 IPR002110 GO:0005515
Mal2g1947 768 Gene3D - 149 259 IPR036770 -
Mal2g1947 768 Gene3D - 431 534 IPR036770 -
Mal2g1947 768 Gene3D - 12 148 IPR036770 -
Mal2g1947 768 ProSiteProfiles Ankyrin repeat profile. 85 117 IPR002110 GO:0005515
Mal2g1947 768 ProSiteProfiles Ankyrin repeat profile. 557 581 IPR002110 GO:0005515
Mal2g1947 768 ProSiteProfiles Ankyrin repeat region circular profile. 557 581 - -
Mal2g1947 768 ProSiteProfiles Ankyrin repeat region circular profile. 591 623 - -
Mal2g1947 768 SUPERFAMILY Ankyrin repeat 309 632 IPR036770 -
Mal2g1947 768 ProSiteProfiles Ankyrin repeat region circular profile. 85 115 - -
Mal2g1947 768 SMART ANK_2a 483 512 IPR002110 GO:0005515
Mal2g1947 768 SMART ANK_2a 176 205 IPR002110 GO:0005515
Mal2g1947 768 SMART ANK_2a 117 146 IPR002110 GO:0005515
Mal2g1947 768 SMART ANK_2a 346 375 IPR002110 GO:0005515
Mal2g1947 768 SMART ANK_2a 557 587 IPR002110 GO:0005515
Mal2g1947 768 SMART ANK_2a 379 408 IPR002110 GO:0005515
Mal2g1947 768 SMART ANK_2a 591 620 IPR002110 GO:0005515
Mal2g1947 768 SMART ANK_2a 85 114 IPR002110 GO:0005515
Mal2g1947 768 SMART ANK_2a 449 477 IPR002110 GO:0005515
Mal2g1947 768 SMART ANK_2a 222 251 IPR002110 GO:0005515
Mal2g1947 768 SMART ANK_2a 309 338 IPR002110 GO:0005515
Mal2g1947 768 ProSiteProfiles Ankyrin repeat profile. 379 411 IPR002110 GO:0005515
Mal2g1947 768 PANTHER ANKYRIN DOMAIN PROTEIN 9 762 - -
Mal2g1947 768 SUPERFAMILY Ankyrin repeat 28 256 IPR036770 -
Mal2g1947 768 Pfam Ankyrin repeats (many copies) 461 504 IPR002110 GO:0005515
Mal2g1947 768 Gene3D - 295 430 IPR036770 -
Mal2g1947 768 Gene3D - 535 669 IPR036770 -
Mal2g1947 768 PANTHER ANKYRIN REPEAT-CONTAINING 9 762 - -
Mal2g1947 768 ProSiteProfiles Ankyrin repeat profile. 591 623 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1947 Mal-Chr2 23742712 23747419 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1947 309 538 Ion Channels AT2G25600 27.016 2.43e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1947 - - mtr:MTR_3g085630 1379.77