Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1921 ATGGAAACTGAGGAAGGAATAGGAAATCCTGCTGACACTGAATATGCTGAAGGAGTTCGGTGTTTGAAACGCAAAGCCATTGATGATGGGGTGCCAATTTCCAATGGAAATGGTGTTTTTGAAGAGGGTAGGCATTCAGAAAGTGAAGCTTTGAATGATGGGGCGGTGTTTGCGAATGGGAATGGTGTTGCTGCTGTGGCTGAGGTTTTGAAAAATGATGTTTTGAATAATGGGGTGGATGGAAATGGTGTTGCTGAAGATGCTCGACACTCGGAAAGTGAAGTCGTGAATGATGGGGCAGTGGTTTCGAATGGAAATAATGTTACTGAAGAGGTTGGAGTCTTGAAAAGTGAAGCCGTTAGCAATGGGGTGGCAAGTTCCGGTGGGTTTGATTCTGGCGACGGAGGCTCTGGTGGAGTTACTTGTCTTCGAACTTATAAGAGGCGGAAGTATGATAAGTCGAGTTCAAAAGGCAAAGCGCAAGAGGATTGTGGAAAATGTGTGGAAACTGCGAGTCACATAGCAGACCAGGTTGAGAAGGAACCCTTAGATGCAACTTTAGGCAATACTGCAGATGATTATGCCCATATACATTGGGGAAGTGTGGTACTAAAGCATTTATATCAGTCATTAGGCAATGGTGGCATAGAGGGGTGCACAGGGGGAGCACTAATTCACCATCAAAGTTGTGCCACTACAGTTATGGGAAATTCTAAAATTGGCAAAGATGGACAAGAATTCTCTTCACAATTTGATTGTTTATCTCATAGAACACGAACTGAAGCTAATGGGCATGCACATGTCATGCAAAATGGATCTTCTAGTGAACCACATGGCCATGGTGTGACTGAGATGTGTCAGCGTGTGCTCTGCAATGTATTAAACTCAGAAGAATTCAATTCATTATGCAGGATTTTATTTGAAAAATTCCAAGGATTGAAGCCGGAAAGTGTATTTGATTTTAGTGTCATAACCTCAAGGATGAAGCAGAAAATCTATGAACAATCACCTGCACGTTTCTTGTCAGATATTCAACAGGTCTTCGGAAAGCTTAAAGATACATGTAATGTGATTCTTGCTCTTTCTAATAGCCTCTCCAACATATCAACAAATTCCTACTCTGAGCTGGTTGGAATTTCAGCGCAGAGCACATTTGAAGATGAAAAACAAGTGGAATTGGACTCTCACATGAAGCCGGAGCAGACGGAAGAATGCGCTACCTATAAAGTTTGCTGTTGCAGTAGTTGTGGAGAAAAGGCAGATGGCACAGACTGTTTGGTCTGTGATTCATGTGAGAAGGTGTACCATTTGTCCTGTATTGAGCCTGCAGTTAATGAAATACCTCACAAAAGCTGGTACTGTGCTAGTTGCACCACAGGTGGCTTTGGATCTCCGCATGAAAATTGTGTAGTATGTGCGAGGTTGAATGACACAAAGACGCCCAAGAAAATAATTGGCGACGAAAGCCTCCCTACAAATGAGGAAACACTTGATGAATTTGATGATAATTCAAATGGCAGCTATGATGGGATTCAAGTATCTACAGGTGAAAAAGTCAATTGCAAAGTGTGTGGAAATGAAGTTGAAGTCAAAGGTGGAAAAATAAGAATATGTGGTCATCCTTTTTGTCCAAGTAAATACTACCATGCAAGGTGTTTGACAAACAAGCAATTAGTTTCATATGGCAGTTGGTGGTACTGCCCTTCATGTATATGCCAAGTTTGCCTCACGGATCAAGATGATTCACAGATTGTCCTCTGTGATGGCTGTGATCATGCATATCACATCTATTGCATGAAACCTCCACTAGATTCTATTCCAGCAGAGAAATGGTTCTGCAGAAAATGTGATGCTGGACTCAAGGCAATATCCCAGGCAAAAAAAGCATATGAGAGTAACAAGCCGAGAACCGGTGACAATGCTTCAAAGCCAAATGCTAATAACAATTGCAATAATAAATGTGTAGAAGAATTGGAAAGTGGTGGTGGAATGGACATGCTTTTAACTGCTGCCAATTGTCTGAATTTTGTAGAGAATTTGGCGGAAAACAGTTTGAGTAGCAGAGGACATGGGTTTTCTTGA 2082 0.4179 METEEGIGNPADTEYAEGVRCLKRKAIDDGVPISNGNGVFEEGRHSESEALNDGAVFANGNGVAAVAEVLKNDVLNNGVDGNGVAEDARHSESEVVNDGAVVSNGNNVTEEVGVLKSEAVSNGVASSGGFDSGDGGSGGVTCLRTYKRRKYDKSSSKGKAQEDCGKCVETASHIADQVEKEPLDATLGNTADDYAHIHWGSVVLKHLYQSLGNGGIEGCTGGALIHHQSCATTVMGNSKIGKDGQEFSSQFDCLSHRTRTEANGHAHVMQNGSSSEPHGHGVTEMCQRVLCNVLNSEEFNSLCRILFEKFQGLKPESVFDFSVITSRMKQKIYEQSPARFLSDIQQVFGKLKDTCNVILALSNSLSNISTNSYSELVGISAQSTFEDEKQVELDSHMKPEQTEECATYKVCCCSSCGEKADGTDCLVCDSCEKVYHLSCIEPAVNEIPHKSWYCASCTTGGFGSPHENCVVCARLNDTKTPKKIIGDESLPTNEETLDEFDDNSNGSYDGIQVSTGEKVNCKVCGNEVEVKGGKIRICGHPFCPSKYYHARCLTNKQLVSYGSWWYCPSCICQVCLTDQDDSQIVLCDGCDHAYHIYCMKPPLDSIPAEKWFCRKCDAGLKAISQAKKAYESNKPRTGDNASKPNANNNCNNKCVEELESGGGMDMLLTAANCLNFVENLAENSLSSRGHGFS* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1921 693 SUPERFAMILY FYVE/PHD zinc finger 399 458 IPR011011 -
Mal2g1921 693 SMART ring_2 572 616 IPR001841 -
Mal2g1921 693 SMART ring_2 413 457 IPR001841 -
Mal2g1921 693 SMART ring_2 521 570 IPR001841 -
Mal2g1921 693 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 512 622 IPR013083 -
Mal2g1921 693 Pfam PHD-finger 413 459 IPR019787 -
Mal2g1921 693 Pfam PHD-finger 571 617 IPR019787 -
Mal2g1921 693 PANTHER HISTONE ACETYLTRANSFERASE 204 675 - -
Mal2g1921 693 Gene3D - 316 460 - -
Mal2g1921 693 SMART PHD_3 572 617 IPR001965 -
Mal2g1921 693 SMART PHD_3 412 458 IPR001965 -
Mal2g1921 693 SMART PHD_3 520 571 IPR001965 -
Mal2g1921 693 ProSiteProfiles Zinc finger PHD-type profile. 410 460 IPR019787 -
Mal2g1921 693 PANTHER D4, ISOFORM A 204 675 - -
Mal2g1921 693 ProSiteProfiles Zinc finger PHD-type profile. 569 619 IPR019787 -
Mal2g1921 693 SUPERFAMILY FYVE/PHD zinc finger 571 621 IPR011011 -
Mal2g1921 693 SUPERFAMILY FYVE/PHD zinc finger 516 571 IPR011011 -
Mal2g1921 693 ProSitePatterns Zinc finger PHD-type signature. 567 616 IPR019786 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1921 571 638 C2H2 Transcription Factor Family AT3G01460 39.706 1.67e-12 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mal2g1921 PHD 3.5e-13 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1921 - - gmx:100795906 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1921 2 23216475 23221298 Mal2g1921 2 23216475 23221298 ECH