LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g1908	ATGGCTGTGCATTCAAAGCAGCTGCTGCTAATGGTGGTTGTTGCCCTTTATACAAAAGCAGCGACTCAACCGGTGTCACTACCAAACAAAAATTGTTCTCTAGACAACACCTTTCTTATTGATTGCAACAAAACATCTCCAACCTCAACATACGCACCATTCTTGCCACAGAGTAATCAAAGTGTTCTAAACATCTCTCTCAATGGTGAACTGCGTGTTGCATGGCCAGTAGCCAGTGATTGCTATTCAAAAAATGGCACAACAGTGAGCGAAACAAATCAGGGCATCAACATGACACATTTTCACATCTCACCAACTCAAAATAAGTTGATAGCAGTTGGTTGTGACACAATTGGAGTATTCTCAGCTATTGATTTCGATGAAAACAACTATACCACAGGATGTGTGGCTTTGTGCAACAATCCTACTGATATATTGCCCAATGAATCTTGTTCGAGCACTGGCTGTTGGGAGATTTCAATCCCCCAAGGTCATGTGTTTACGGAAGCAGCCTATGGTACTGCTGCAGTCCTAAATAATCACTCAGCAGTACATGACTTCAATCCATGTGGTTATGCTTTTTTGGTTGAAAATGGAGCCTACAACTTTGCATCCACAGACCTCCACAAGTTGGAGAAGGAGGAGTTTCCTGTGTTGTTGGATTGGGCAATAGGGAGCCAAACATGTCAGCAAGCTCAGAATGATCTTTCCAATTATGCGTGTAAGGCCGACAAAAGTATATGTGACTATTCAGCAACCGACAGACCAGGTTACCTTTGCAAATGCATTCATGGATATCAGGGAAATCCTTACCTCATTAATGGTTGCCAATATATTGATGAGTGCATGGACTCCAATGTATGTGTTGAGGGGGCAACATGCATCAATGATCCTGGAGGCTACCATTGTGTATGCCTGACAGGATATGAGGGAAACAGGAAGATGAATGAAACAGGCTGCAGTCCAAGATCCAGTACCAAATCAAGGAGAGAGATCATATTGATCATTGCATTGAGTGTCAGCGCAAGCCTCGTAGCACTACTGGTTGGAAGCTTTTATGCATATTTGACATTCAAGAAAAGAAAACTCATTAAACTTAAAGAACATTTTTTTCAACAAAACGGTGGCTTACTCTTACAACAACAGATTGGGAGGTACGGAGGCTCAACTGACACAGCTAAAGTGTTCACTATTGAGGAGTTAAATGAAGCAACAAACAACTTCAATGAAACCAAGATCCTAGGCCAAGGTGGTCAGGGAACAGTTTACAAAGGTGTTTTAAAAGATAACAGAACTGTAGCAATAAAGAAGTCAAAAATCAGTGACCCAAACCAAATCGAGCCGTTCATCAATGAAGTGATTGTGCTTTCTCAAATCAATCATAGAAATGTGGTAAAGCTTTTGGGTTGTTGTTTAGAGGAAGAAGTTACCTTGCTTGTTTATGAATTCATTTCCAATGGTACTCTTTATGAGCATCTTCATGATCAAAACCAATCTATAAAGCTTACATGGAATACAAGATTGAGAATAGCAAAAGAAACTGCCGGTGTCCTGGCATACTTACACTCTGCTGCTTCTACACCAATCATACATAGAGATGTGAAATCTACAAATATACTTCTTGATCATAATCTCACTGCAAAGGTTTCTGACTTTGGAGCTTCAAGGATTGTTCCTCTTGATCATAGTCAGATAACCACTCTAGTGCAGGGGACATTGGGGTATCTTGACCCAGAATACTTCCACACAAGCCAATTAACAGAGAAGAGTGACGTCTATAGCTTTGGGGTTGTCCTAGCAGAGATAATGACAGGAAAGAAGGCACTCTCTTTTGGCAGGCCGGAGATAGATAGAAACCTTGCAGTGTACTTTGTTTCTTCAATGAAAGAGGATCGGTTACTTAATATTTTGGACCGAAATATAGTTGAGCCAAATATTGAGCAAGTAAAGGAAGTTGCCAATATTGCAGAAAGGTGTTTGAGGGTGAAGGGTGAGGAAAGACCTACCATGAAAGAAGTGGCAACAGAACTGGAAGGAATATTAATTATTGAAGAGCACCGTTGGGGAAGTGACAATTTGTCTTCAGAAGAGACTGAAAACTTGCTCGAAGCAGCAACATCCATTATCAATATTGAAAATGGTGTTGGTGGAAGTGGCATTAATTCTTGTGACTCATGTAGCATAAACCAAGTTTCCATGTCATTGATTGGTGGAAGATGA	2220	0.4072	MAVHSKQLLLMVVVALYTKAATQPVSLPNKNCSLDNTFLIDCNKTSPTSTYAPFLPQSNQSVLNISLNGELRVAWPVASDCYSKNGTTVSETNQGINMTHFHISPTQNKLIAVGCDTIGVFSAIDFDENNYTTGCVALCNNPTDILPNESCSSTGCWEISIPQGHVFTEAAYGTAAVLNNHSAVHDFNPCGYAFLVENGAYNFASTDLHKLEKEEFPVLLDWAIGSQTCQQAQNDLSNYACKADKSICDYSATDRPGYLCKCIHGYQGNPYLINGCQYIDECMDSNVCVEGATCINDPGGYHCVCLTGYEGNRKMNETGCSPRSSTKSRREIILIIALSVSASLVALLVGSFYAYLTFKKRKLIKLKEHFFQQNGGLLLQQQIGRYGGSTDTAKVFTIEELNEATNNFNETKILGQGGQGTVYKGVLKDNRTVAIKKSKISDPNQIEPFINEVIVLSQINHRNVVKLLGCCLEEEVTLLVYEFISNGTLYEHLHDQNQSIKLTWNTRLRIAKETAGVLAYLHSAASTPIIHRDVKSTNILLDHNLTAKVSDFGASRIVPLDHSQITTLVQGTLGYLDPEYFHTSQLTEKSDVYSFGVVLAEIMTGKKALSFGRPEIDRNLAVYFVSSMKEDRLLNILDRNIVEPNIEQVKEVANIAERCLRVKGEERPTMKEVATELEGILIIEEHRWGSDNLSSEETENLLEAATSIINIENGVGGSGINSCDSCSINQVSMSLIGGR*	740

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g1908	739	ProSitePatterns	Aspartic acid and asparagine hydroxylation site.	294	305	IPR000152	-
	Mal2g1908	739	PANTHER	WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21	30	713	IPR045274	GO:0007166
	Mal2g1908	739	CDD	EGF_CA	279	313	-	-
	Mal2g1908	739	ProSiteProfiles	Protein kinase domain profile.	408	689	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal2g1908	739	ProSiteProfiles	EGF-like domain profile.	278	315	IPR000742	-
	Mal2g1908	739	SMART	serkin_6	408	681	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal2g1908	739	Gene3D	Transferase(Phosphotransferase) domain 1	484	698	-	-
	Mal2g1908	739	SUPERFAMILY	EGF/Laminin	279	313	-	-
	Mal2g1908	739	SMART	egf_5	228	277	IPR000742	-
	Mal2g1908	739	SMART	egf_5	281	321	IPR000742	-
	Mal2g1908	739	PANTHER	WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED	30	713	-	-
	Mal2g1908	739	SMART	egfca_6	279	321	IPR001881	GO:0005509
	Mal2g1908	739	Pfam	Protein tyrosine and serine/threonine kinase	411	677	IPR001245	GO:0004672\|GO:0006468
	Mal2g1908	739	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	529	541	IPR008271	GO:0004672\|GO:0006468
	Mal2g1908	739	CDD	STKc_IRAK	414	680	-	-
	Mal2g1908	739	Gene3D	Phosphorylase Kinase; domain 1	379	483	-	-
	Mal2g1908	739	SUPERFAMILY	Protein kinase-like (PK-like)	390	683	IPR011009	-
	Mal2g1908	739	Pfam	Calcium-binding EGF domain	279	318	IPR001881	GO:0005509
	Mal2g1908	739	Gene3D	Laminin	279	316	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g1908	Mal-Chr2	23054921	23057922	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g1908	1	702	Receptor kinase-like Gene Family	AT1G21230	45.392	0.0	578

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_WAK	Mal2g1908		PK_Tyr_Ser-Thr	3e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g1908	-		-	mtr:MTR_3g088780	964.526