Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1907 ATGGCTGTGCAGTACTCAAAACAATTGTTTCTGATTGTGATTGTTGCTGTTTTTTTTACAAGAGCAGCAAGTCAACCGAAACCATCACCAAACTGTCAAAGAAAGTGTGGTTCTGTCACCATTCCCTTCCCATTTGGAACCACCAAAAAATGTTCCCTAGACCACACTTTCCTCATCTATTGCAACTCAACAACACACGTACCTTTCTTGCCAAACACTAACCAAACAGTCTTAAATATCTCACTTAACGGTGAACTGCGTGTTGAATGGCCAGTAGCCAGTGATTGCTATGCACAAAATGACACAATAGTGAACCAAACATCAATTGATATCAATATGAAACATTTTCAAATCTCTCCCACTCGGAACAAGTTGATAGCAGTTGGCTGTGACACAGCTGGAATGGTCACATCATTTGATTCCGAGGGAAAAAACTACACCAGTGTTTGTGTGGCTGTGTGCAATAGACGTGGTGATCTCGTGGCTAATGAATCTTGTTCTGGTCCTGGTTGTTGCGAGATTGCAATACCTCAAGGCCGTGTGTTAACGGAAGTATTCTATTCTTCTCAAAGCTCGTCGTATCACTCACTAGTATATGACTTCAATCCATGTGGTTATGCTTTTTTTGCTGAAAAAGGAGCCTACACCTTCACATCCACAGACCTCCAGAAGTTAAACAAGAATTACTTTCCTGTGTCGTTGGACTGGTCAGTAGGGAACCAAACGTGCCAGCAAACTCAGAAGGATCTTTCAAGTTATGCTTGTAAGGCAGACAAAAGTATATGTTACGATGCAGCAACCGACAAATCTGGTTACCTTTGCAAATGCTTTGATGGATATAAAGGAAATCCTTACCTCATTCATGGTTGTGAAGATATTAATGAATGCAAGGAGTCTAATGATTGTGTCCAAGAGGCAACATGTCTCAATCTTCCCGGAAGCTACCATTGTTTATGCCCGGAAGGACATGAGGGAGACGGAAAGACGAATGGAACAAGATGCAGTCCAAAATCAAGGAAAGATATCATATATATAATTCTATTGAGTGTTTGCGTAAGCCTCGTAACACTATTGGTAGGAACCAATTATGCTCGTTTGGCATTGAAGAAAAGAAAGCTCGTTAAACTTAGAGAACGTTTTTTTCAACAAAATGGTGGCTTACTGTTGCAACAAAAGATAGGGAGACATGGAAGGTCAACTGAAACAGCTAAAGTGTTCACTATTGAGGAGCTAAATGTAGCAACAAACAACTTCAATGAAAGCAAGATCCTAGGCCAAGGTGGGCAGGGAACAGTTTACCTAGGAGTGTTACAAGATAACAGAACTGTAGCAATAAAGAAATCTAAAATCAGTGACCGAAGCCAAATCGAGCCGTTCATCAATGAAGTGATTGTGCTTTCTCAAATCAATCATAGAAATGTTGTAAGGCTTTTGGGTTGTTGTTTAGAGACAGAAGTTCCCTTGTTGGTTTATGAATTTATTCCCAATGAGCTTACATGGAAAACAAGATTGAGAATAGCAAAAGAAATTGCTGGAGCCCTGGCATACTTACACTCTGCTGCTTCTACACCAATCATACATAGAGATGTGAAATCTGCAAATATACTCCTAGATCACAATCTCACTGCAAAGGTTTCTGACTTTGGAGCATCAAGGATTGTTCCTTTTGATCAAAGTCAGATAACCACTCTAGTGCAGGGGACAATGGGGTATCTTGACCCCGAATACTTTCAAACAAGCGTGTTAACAGATAAGAGTGATGTCTATAGCTTTGGGGTTGTCCTCGCAGAGCTACTGACAGGAAAGGAAGCATTGTGTTTTAGCAGGCCAGAGGTAGAAAGAAGCCTTGCAATGTATTTTGTTTCTTCAATGAAACAAGACCAGTTACTTCATATTCTGGACAGCAAGATTGATGGGGGAAATGTTGAGCAGTTAAAGAAAGTTGCCAATATTGCAGAAAGGTGCTTAAAGATGAACAATGAGGAAAGGCCCACCATGAAAGAAGTGGCAAGGGGACTAGAGGGAATATTAATTATTGAATAG 2043 0.4048 MAVQYSKQLFLIVIVAVFFTRAASQPKPSPNCQRKCGSVTIPFPFGTTKKCSLDHTFLIYCNSTTHVPFLPNTNQTVLNISLNGELRVEWPVASDCYAQNDTIVNQTSIDINMKHFQISPTRNKLIAVGCDTAGMVTSFDSEGKNYTSVCVAVCNRRGDLVANESCSGPGCCEIAIPQGRVLTEVFYSSQSSSYHSLVYDFNPCGYAFFAEKGAYTFTSTDLQKLNKNYFPVSLDWSVGNQTCQQTQKDLSSYACKADKSICYDAATDKSGYLCKCFDGYKGNPYLIHGCEDINECKESNDCVQEATCLNLPGSYHCLCPEGHEGDGKTNGTRCSPKSRKDIIYIILLSVCVSLVTLLVGTNYARLALKKRKLVKLRERFFQQNGGLLLQQKIGRHGRSTETAKVFTIEELNVATNNFNESKILGQGGQGTVYLGVLQDNRTVAIKKSKISDRSQIEPFINEVIVLSQINHRNVVRLLGCCLETEVPLLVYEFIPNELTWKTRLRIAKEIAGALAYLHSAASTPIIHRDVKSANILLDHNLTAKVSDFGASRIVPFDQSQITTLVQGTMGYLDPEYFQTSVLTDKSDVYSFGVVLAELLTGKEALCFSRPEVERSLAMYFVSSMKQDQLLHILDSKIDGGNVEQLKKVANIAERCLKMNNEERPTMKEVARGLEGILIIE* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1907 680 Gene3D Laminin 240 334 - -
Mal2g1907 680 ProSiteProfiles EGF-like domain profile. 292 335 IPR000742 -
Mal2g1907 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 525 537 IPR008271 GO:0004672|GO:0006468
Mal2g1907 680 CDD EGF_CA 292 326 - -
Mal2g1907 680 Pfam Calcium-binding EGF domain 292 334 IPR001881 GO:0005509
Mal2g1907 680 CDD STKc_IRAK 424 676 - -
Mal2g1907 680 SMART serkin_6 418 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1907 680 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 17 677 - -
Mal2g1907 680 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 677 IPR045274 GO:0007166
Mal2g1907 680 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 308 319 IPR000152 -
Mal2g1907 680 ProSiteProfiles Protein kinase domain profile. 418 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1907 680 SMART egf_5 242 291 IPR000742 -
Mal2g1907 680 SMART egf_5 295 335 IPR000742 -
Mal2g1907 680 Pfam Protein kinase domain 418 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1907 680 Gene3D Transferase(Phosphotransferase) domain 1 493 678 - -
Mal2g1907 680 Pfam Wall-associated receptor kinase galacturonan-binding 32 84 IPR025287 GO:0030247
Mal2g1907 680 SUPERFAMILY Protein kinase-like (PK-like) 400 673 IPR011009 -
Mal2g1907 680 SMART egfca_6 292 335 IPR001881 GO:0005509
Mal2g1907 680 SUPERFAMILY EGF/Laminin 292 327 - -
Mal2g1907 680 ProSitePatterns Calcium-binding EGF-like domain signature. 292 317 IPR018097 GO:0005509
Mal2g1907 680 Gene3D Phosphorylase Kinase; domain 1 391 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1907 Mal-Chr2 23033173 23036131 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1907 12 678 Receptor kinase-like Gene Family AT1G21230 46.418 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mal2g1907 Pkinase 6.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1907 - - mtr:MTR_3g088780 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1907 2 23033173 23036131 Mal2g1907 2 23033173 23036131 ECH