Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1904 ATGGCTGTCCAGTACTCAAAACAGATGCTTCTGATGTTTGTTCTTGCTGTTTTTTATACAAAAGTAGCAACTCAACCTATGTCACTACCAAACTGTCAAACAAATTGTGGTTCTGTCACCATTCCCTTTCCATTCGGATTCAGCGAGGGTTGTTTCCTCGACAGCACCTTCCTTATCAGTTGCAACGAAACATCTTCAACTCCATCAAACTCAACAGAGCTCATACCTTTCTTGCCAAACACTAACCAAACTGTCTTAAATATCTCACTTAACGGTGAACTGCGCGTTGCATGGCCTGTAGCCAGTGATTGCTATGCACAAAATAAAACACAAGTGAATCAATCATATCAGGATATCTATATGACAGATTTTCACGTCTCACCCACTCGGAACAAGTTGATAGCAGTTGGCTGTGACACAATTGGAATAGTCACATCAATTGATTCCGAGGGAAACAACTACACCACTGGATGTCTGGCTTTGTGCAATAGACGTGGTGATCTCGTGGCCAATGAATCTTGTTCTGGTCCTGGTTGTTGCGAAAGTGCAATACCTCAAGGCCGTGTGTTAACCGAAGTATTCTATTATTCTCAAAGCTCGTGGAATCACTCACCAGTATTTGACTTCAATCCGTGTGGTTACGCTTTTTTTGCTGAAAAAGGAGCCTACACCTTCACATCCACAGACCTCCACGAGTTAGAGAAGAATTATTTTCCTGTGTCGTTGGACTGGTCAGTAGGGAACCAAACGTGCCAGCAAACTCAGAAGAATCTTTCAAGTTATGCTTGTAAGGCAGACAAAAGTATATGTTACGATGCAGCAACCGACAAATCTGGTTACCTTTGCAAATGCTTTGATGGATATAGAGGAAATCCTTACCTCACTCATGGTTGTGAAGATATTAATGAATGCAAGGAGTCTAATGATTGTGTTCAAGAGGCAACATGTCTAAATCATCCCGGAAGCTACCAATGTTTATGCCCAAAAGGACATGAGGGAAACGGAAAAATGAATGGAACAAGATGCAGTCCAAAATCAAGGAAAGATATCATATATATCATTCTTATGAGTGTTTGTGTAAGCCTCGTAGCACTACTGGTTGGAAGCAATTACGCTCGTTTGTCATTGAAGAAAAGAAAGCTCGTTAAACTTAGAGAACATTATTTTCAACAAAATGGTGGCTTACTTCTGCAACAAAAGATAGGGAGACATGGAGGAGCTAAAGTGTTCACTATTGACGAGCTAAATGAAGCAACAAACAACTTCAATGAAAGCAAGATCCTCGGACAAGGTGGTCACGGAACAGTTTACGAAGGAGTGTTACAAGATAACAGAACTGTAGCAATAAAGAAGTCTATAATCAGTGACCGAAGCCAAATCGAGCAGTTCATCAATGAAGTGATTGTGCTTTCTCAAATCAATCATAGAAATGTGGTTAAGCTTTTGGGTTGTTGTTTAGAGGAAGAAGTTCCCTTGCTTGTTTATGAATTCATTTCCAATGGTAGTGTTTATGAGCATCTTCAAAATCAAAACCAATCTATAAAGCTTAAATGGAAAACAAGATTGAGAATAGCAAAAGAAACAGCTGGAGCCCTAGCATACTTACACTCTGCTGCATCTACACCAATCATACATAGAGATGTGAAATCTGAAAATATACTCCTAGATCACAATCTCACTGCAAAGGTTGCTGACTTTGGAGCTTCAAAGATTGTTCCTCTTGATCGTAGTCAGATAGCCACTCTTGTGCAGGGGACATTGGGGTATCTTGATCCAGAATACTTTCAAAGAAGCATGTTAACAGATAAGAGTGATGTGTATAGCTTTGGGGTTGTCCTAGCAGAGCTACTGACAGGAAAGAAAGCACTATGTTTTGGTAGGCCAGAGGTAGAAAGAAGCCTTGCAATGTATTTTGTTTCTTCAATGAAACAAGGCCGGTTACTTCATATTCTGGACAGCAACATTGTTGGGGGGAATGTTGAGCATCTAAAGAAAGTTGCCAATATTGCAGAAAGGTGTTTAAAGGTGAAAAGTGAGGAAAGGCCCACCATGAATGAAGTGGCAATGGAACTAGAAAGATTATTAGTTATTGAAGAACAACAGTAA 2106 0.4012 MAVQYSKQMLLMFVLAVFYTKVATQPMSLPNCQTNCGSVTIPFPFGFSEGCFLDSTFLISCNETSSTPSNSTELIPFLPNTNQTVLNISLNGELRVAWPVASDCYAQNKTQVNQSYQDIYMTDFHVSPTRNKLIAVGCDTIGIVTSIDSEGNNYTTGCLALCNRRGDLVANESCSGPGCCESAIPQGRVLTEVFYYSQSSWNHSPVFDFNPCGYAFFAEKGAYTFTSTDLHELEKNYFPVSLDWSVGNQTCQQTQKNLSSYACKADKSICYDAATDKSGYLCKCFDGYRGNPYLTHGCEDINECKESNDCVQEATCLNHPGSYQCLCPKGHEGNGKMNGTRCSPKSRKDIIYIILMSVCVSLVALLVGSNYARLSLKKRKLVKLREHYFQQNGGLLLQQKIGRHGGAKVFTIDELNEATNNFNESKILGQGGHGTVYEGVLQDNRTVAIKKSIISDRSQIEQFINEVIVLSQINHRNVVKLLGCCLEEEVPLLVYEFISNGSVYEHLQNQNQSIKLKWKTRLRIAKETAGALAYLHSAASTPIIHRDVKSENILLDHNLTAKVADFGASKIVPLDRSQIATLVQGTLGYLDPEYFQRSMLTDKSDVYSFGVVLAELLTGKKALCFGRPEVERSLAMYFVSSMKQGRLLHILDSNIVGGNVEHLKKVANIAERCLKVKSEERPTMNEVAMELERLLVIEEQQ* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1904 701 SUPERFAMILY EGF/Laminin 300 335 - -
Mal2g1904 701 Pfam Wall-associated receptor kinase galacturonan-binding 32 95 IPR025287 GO:0030247
Mal2g1904 701 ProSitePatterns Protein kinases ATP-binding region signature. 428 451 IPR017441 GO:0005524
Mal2g1904 701 ProSiteProfiles Protein kinase domain profile. 422 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1904 701 CDD EGF_CA 300 333 - -
Mal2g1904 701 ProSiteProfiles EGF-like domain profile. 300 343 IPR000742 -
Mal2g1904 701 SMART serkin_6 422 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1904 701 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 316 327 IPR000152 -
Mal2g1904 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Mal2g1904 701 SMART egfca_6 300 343 IPR001881 GO:0005509
Mal2g1904 701 Gene3D Laminin 248 342 - -
Mal2g1904 701 Gene3D Transferase(Phosphotransferase) domain 1 498 701 - -
Mal2g1904 701 Pfam Protein kinase domain 422 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1904 701 Pfam Calcium-binding EGF domain 300 342 IPR001881 GO:0005509
Mal2g1904 701 ProSitePatterns Calcium-binding EGF-like domain signature. 300 325 IPR018097 GO:0005509
Mal2g1904 701 SUPERFAMILY Protein kinase-like (PK-like) 406 691 IPR011009 -
Mal2g1904 701 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 17 700 - -
Mal2g1904 701 CDD STKc_IRAK 428 694 - -
Mal2g1904 701 Gene3D Phosphorylase Kinase; domain 1 397 497 - -
Mal2g1904 701 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 700 IPR045274 GO:0007166
Mal2g1904 701 SMART egf_5 250 299 IPR000742 -
Mal2g1904 701 SMART egf_5 303 343 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1904 Mal-Chr2 22968171 22970880 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1904 12 696 Receptor kinase-like Gene Family AT1G21230 46.328 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mal2g1904 Pkinase 3.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1904 - - mtr:MTR_3g088780 969.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1904 2 22968171 22970880 Mal2g1904 2 22968171 22970880 ECH