Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1903 ATGGCTGTCCAGTACTCAAAACAGATGCTTCTGATGTTTGTTCTTGCTGTTTTTTATACAAAAGTAGCAACTCAACCTATGTCACTACCAAACTGTCAAACAAATTGTGGTTCTGTCACCATTCCCTTTCCATTCGGATTCAGCGAGGGTTGTTTCCTCGACAGCACCTTCCTTATCAGTTGCAACGAAACATCTTCAACTCCATCAAACTCATCAAAGCTCGTACCTTTCTTGCCAAACACTAACCAAACGGTCTTAAATATCTCACTTAACGGTGAACTGCGCGTTGCATGGCCTGCAGCCAGTGATTGCTATGGACAAAATGGTAAAAAAGTGAACCAAACAGGTCTGGATGTCAGTATGACAGATTTTCACATATCGCCCACTCGGAACAAGTTGATAGCAGTTGGCTGTGACACAGCTGGAATTGTCACAGCAATTGATTCCGAGGGAAACAACTACACCACTGGATGTCTGGCTTTGTGCAATAGACGTGGTGATCTCGTGGCCAATGAATCTTGTACCGGTCCTGGTTGTTGCGAGAGTGCAATACCTCAAGGCCGTGTGTTAACGGAAGTATTCTATTATTCTCAAAGCATGACGAATCACTCAGCAGTACATGACTTCAATCCGTGTGGTTATGCTTTTTTTGCTGAAAAAGGAGCCTACACCTTCACATCCACAGACCTCCACAAGTTAAAGAAGAATTATTTTCCTGTGTCGATGGACTGGTCGGTAGGGAACCAAACGTGCCAGCAAACTCAGAAGGATCTTTCAAATTATGCTTGTAAGGCGGACAAAAGTATATGTTACGATGCAGCAACCGACAAATCTGGTTACCTTTGCAAATGCTTTGATGGATATAGAGGAAATCCTTACCTCACTCATGGTTGTGAAGATATTAATGAATGCAAGGAGTCTAATGATTGTGTCCAAGAGGCAACATGTCTCAATCTTCCCGGAAGCTACCAATGTTCATGCCCAAAAGGACATGAGGGAAACGGAAAAATGAATGGAACAAGATGCAGTCCAAAATCAAGGAAAGATATCATATATATCATTCTATTGAGTGTTTGCGTAAGCCTCGTAGCACTACTGGTTGGAAGCAATTATGCTCGTTTGGCATTGAAGAAAAGAAAGCTCGTTAAACTTAGAGAACATTTTTTTCAACAAAATGGTGGCTTACTGTTGCAACAAAAGATAGGGAGACATGGAAGGTCAACTGAAACAGCTAAAGTGTTCACTATTGAGGAGCTAAATGTAGCAACAAACAACTTCAATGAAAGCAAGATCCTAGGCCAAGGTGGGCAGGGAACAGTTTACCTAGGAGTGTTACAAGATAACAGAACTGTAGCAATAAAGAAATCTAAAATCAGTGACCGAAGCCAAATCGAGCCGTTCATCAATGAAGTGATTGTGCTTTCTCAAATCAATCATAGAAATGTTGTAAGGCTTTTGGGTTGTTGTTTAGAGACAGAAGTTCCCTTGTTGGTTTATGAATTTATTCCCAATGAGCTTACATGGAAAACAAGATTGAGAATAGCAAAAGAAATTGCTGGAGCCCTGGCATACTTACACTCTGCTGCTTCTACACCAATCATACATAGAGATGTGAAATCTGCAAATATACTCCTAGATCACAATCTCACTGCAAAGGTTTCTGACTTTGGAGCATCAAGGATTGTTCCTTTTGATCAAAGTCAGATAACCACTCTAGTGCAGGGGACAATGGGGTATCTTGACCCCGAATACTTTCAAACAAGCGTGTTAACAGATAAGAGTGATGTCTATAGCTTTGGGGTTGTCCTCGCAGAGCTACTGACAGGAAAGGAAGCATTGTGTTTTAGCAGGCCAGAGGTAGAAAGAAGCCTTGCAATGTATTTTGTTTCTTCAATGAAACAAGACCAGTTACTTCATATTCTGGACAGCAAGATTGATGGGGGAAATGTTGAGCAGTTAAAGAAAGTTGCCAATATTGCAGAAAGGTGCTTAAAGATGAACAATGAGGAAAGGCCCACCATGAAAGAAGTGGCAAGGGGACTAGAGGGAATATTAATTATTGAATAG 2067 0.4127 MAVQYSKQMLLMFVLAVFYTKVATQPMSLPNCQTNCGSVTIPFPFGFSEGCFLDSTFLISCNETSSTPSNSSKLVPFLPNTNQTVLNISLNGELRVAWPAASDCYGQNGKKVNQTGLDVSMTDFHISPTRNKLIAVGCDTAGIVTAIDSEGNNYTTGCLALCNRRGDLVANESCTGPGCCESAIPQGRVLTEVFYYSQSMTNHSAVHDFNPCGYAFFAEKGAYTFTSTDLHKLKKNYFPVSMDWSVGNQTCQQTQKDLSNYACKADKSICYDAATDKSGYLCKCFDGYRGNPYLTHGCEDINECKESNDCVQEATCLNLPGSYQCSCPKGHEGNGKMNGTRCSPKSRKDIIYIILLSVCVSLVALLVGSNYARLALKKRKLVKLREHFFQQNGGLLLQQKIGRHGRSTETAKVFTIEELNVATNNFNESKILGQGGQGTVYLGVLQDNRTVAIKKSKISDRSQIEPFINEVIVLSQINHRNVVRLLGCCLETEVPLLVYEFIPNELTWKTRLRIAKEIAGALAYLHSAASTPIIHRDVKSANILLDHNLTAKVSDFGASRIVPFDQSQITTLVQGTMGYLDPEYFQTSVLTDKSDVYSFGVVLAELLTGKEALCFSRPEVERSLAMYFVSSMKQDQLLHILDSKIDGGNVEQLKKVANIAERCLKMNNEERPTMKEVARGLEGILIIE* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1903 688 ProSiteProfiles Protein kinase domain profile. 426 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1903 688 SUPERFAMILY Protein kinase-like (PK-like) 408 681 IPR011009 -
Mal2g1903 688 Pfam Protein kinase domain 426 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1903 688 SUPERFAMILY EGF/Laminin 300 335 - -
Mal2g1903 688 SMART egf_5 303 343 IPR000742 -
Mal2g1903 688 SMART egf_5 250 299 IPR000742 -
Mal2g1903 688 Pfam Wall-associated receptor kinase galacturonan-binding 32 95 IPR025287 GO:0030247
Mal2g1903 688 CDD EGF_CA 300 333 - -
Mal2g1903 688 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 316 327 IPR000152 -
Mal2g1903 688 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 16 685 - -
Mal2g1903 688 ProSiteProfiles EGF-like domain profile. 300 343 IPR000742 -
Mal2g1903 688 Gene3D Laminin 245 342 - -
Mal2g1903 688 ProSitePatterns Calcium-binding EGF-like domain signature. 300 325 IPR018097 GO:0005509
Mal2g1903 688 SMART egfca_6 300 343 IPR001881 GO:0005509
Mal2g1903 688 CDD STKc_IRAK 432 684 - -
Mal2g1903 688 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 16 685 IPR045274 GO:0007166
Mal2g1903 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Mal2g1903 688 SMART serkin_6 426 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1903 688 Pfam Calcium-binding EGF domain 300 342 IPR001881 GO:0005509
Mal2g1903 688 Gene3D Phosphorylase Kinase; domain 1 399 500 - -
Mal2g1903 688 Gene3D Transferase(Phosphotransferase) domain 1 501 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1903 Mal-Chr2 22954596 22957326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1903 12 686 Receptor kinase-like Gene Family AT1G21230 46.034 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mal2g1903 Pkinase 7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1903 - - mtr:MTR_3g088780 951.044