Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1887 ATGAATAGAGAGTTACAACAATTTGCAGTATCATCTTCATCTCATTTTCGTAGCCGTTTTCCAAAACCATTCTCTCTACGTAAGAAAGTGCCATGGTGGTACCAAATACTCCATCCACGTTCAAAGTTTATAGCACAATGGAACGTAACATTCCTCTATGCTTGCCTCTTTGCTTTGTATTTAGACCCTCTTTATTTCTATATTCCTATTACTGGAGACAAAGCATGCATGCAAACAGATTTGGTTCTTAGTGTGTTTGTGACGTTCTCGCGCACCGTCGCAGATCTCTTCTTCTTGTTTCACGTCATTCTTAAGTTCAGAACTGCCTTCAATTCTCCTACCTCGCACATTTATGGTCGCAAAGAACTTATCACCGATCCGGGTCAGATTGCCCGCCGATATATCAAGCATGATTTCATCATTGATCTTCTTGCTACCCTTCCTTTGCCCCAGATAGTCATTTGGTTTGTGATTCCAGCAACAAAGAACTCAACTGCAGCTCATGTAAACCACACACTGTCCCTAATCGTTCTCATTCAGTTCATTCCTAGATGTTTTCAGATTTTTCCTTTACAACGCCGAATCTTGAAGACTAGCGGGCTTATAGCCAAAACTGCTTTGGCAGGGGCATTGTACAATCTTGGTTTCTACATGCTAGCTAGCCATGTTTTAGGAGCAACATGGTATGTGTCATCTATTCAAAGACAATATGAGTGTTGGAGAATAATGTGCAAGAAGGAAATGAACAGAACACATTCTCCTTCTTGTAATCCTTCATTTCTTGATTGTGCAACTCTTTATAACAATGAACGCCAAGTTTGGTTCCGACGCACTAGAGTCCTCACAGCTTGTGATGCACTCAATGATAAAAACCACTTTCAATTTGGAATGTTTGCTGATGCTTTTACTGATCATGTCTCTTCCTCAAGATTCTTCCAAAAATATTTTTATTGCCTTTGGTGGGGTTTGAAAAATCTAAGTTCATATGGACAAAATCTTAAAACTAGTACTTACAGTGGTGAAACATTATTTTCAAGTTTCATATGCATAGCAGGTCTTATCCTGTTCGCACATCTCATCGGTAACATGCAGAATTATCTGCAATCTTCAACTGCAAGACTTGAAGAGTGGAGACTTAGACAAAAAGATACAGAAGAATGGATGAATCATCGCCAACTTCCACCAGAACTACAAGAACGTGTTCGTAGATTTGTTCAGTACAAATGGCTTGCTACTAGAGGCGTTGACGAAGAAGCCATTTTGAAATCCTTGCCCGTTGATCTTCGACGCCAGATTCAGAGGCATCTCTGTCTTGATATTGTTCGCCGGGTACCTTTTTTCGGACAAATGGATGATCAGCTTCTAGATGCTATATGTGAACGTTTAGTTTCATCATTGAACACAAAAGGATCATACATAGTTAGAGAAGGTGATCCAGTGAAAGAGATGCTTTTTATCATCAGAGGAAGTGTAGAGAGTTCTACAACAGATGGTGGTAGATCAGGATTCTTCAATTCAATCACCTTAAAACCAGGTGATTTTTGTGGTGAAGAATTGTTAACATGGGCTTTGATGCCAACATCTAGTCTTAACCTACCATCTTCTACAAGAACTGTAAAAACACTAAGTGAAGTAGAAGCATTTGCACTTAGAGCAGAGGACTTGAAATTTGTGTCGAGCCAGTTTAAGCGTCTTCATAGCAAGAAACTGCAACATGCTTTCAGATACTATTCTCATCAATGGAGAGCTTGGGGAGCATCTTTCATACAAGCTGCTTGGCGGCGTCACCGGAAGAGACAATTGGCAATGGAGTTGTTGGAGAAAGAGAATTTGTATTATGAAGAGAGTGGTGGAGGAGAGAGTTCAATGGGATTAGAGGAGGATAATGCTAGTCATGGACAACATTTTGGTGCTACATTTTTGGCTTCAAAATTTGCTGCAAACACTAAGAAAGGAGCAGTTAAAAATGTTTCAATTATCTCTGATAGTAGCAGTTTGAAGATGCCTAAGATGTTTAAGCCAACTGAGCCTGATTTCTCAACATTTCAAGAAGATTAG 2058 0.397 MNRELQQFAVSSSSHFRSRFPKPFSLRKKVPWWYQILHPRSKFIAQWNVTFLYACLFALYLDPLYFYIPITGDKACMQTDLVLSVFVTFSRTVADLFFLFHVILKFRTAFNSPTSHIYGRKELITDPGQIARRYIKHDFIIDLLATLPLPQIVIWFVIPATKNSTAAHVNHTLSLIVLIQFIPRCFQIFPLQRRILKTSGLIAKTALAGALYNLGFYMLASHVLGATWYVSSIQRQYECWRIMCKKEMNRTHSPSCNPSFLDCATLYNNERQVWFRRTRVLTACDALNDKNHFQFGMFADAFTDHVSSSRFFQKYFYCLWWGLKNLSSYGQNLKTSTYSGETLFSSFICIAGLILFAHLIGNMQNYLQSSTARLEEWRLRQKDTEEWMNHRQLPPELQERVRRFVQYKWLATRGVDEEAILKSLPVDLRRQIQRHLCLDIVRRVPFFGQMDDQLLDAICERLVSSLNTKGSYIVREGDPVKEMLFIIRGSVESSTTDGGRSGFFNSITLKPGDFCGEELLTWALMPTSSLNLPSSTRTVKTLSEVEAFALRAEDLKFVSSQFKRLHSKKLQHAFRYYSHQWRAWGASFIQAAWRRHRKRQLAMELLEKENLYYEESGGGESSMGLEEDNASHGQHFGATFLASKFAANTKKGAVKNVSIISDSSSLKMPKMFKPTEPDFSTFQED* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1887 685 Gene3D Jelly Rolls 444 564 IPR014710 -
Mal2g1887 685 SUPERFAMILY cAMP-binding domain-like 375 571 IPR018490 -
Mal2g1887 685 SUPERFAMILY Voltage-gated potassium channels 39 368 - -
Mal2g1887 685 ProSiteProfiles cAMP/cGMP binding motif profile. 446 529 IPR000595 -
Mal2g1887 685 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 7 682 - -
Mal2g1887 685 SMART cnmp_10 446 574 IPR000595 -
Mal2g1887 685 CDD CAP_ED 446 577 IPR000595 -
Mal2g1887 685 Gene3D Helix hairpin bin 372 437 - -
Mal2g1887 685 Pfam Ion transport protein 47 373 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mal2g1887 685 Gene3D - 65 370 - -
Mal2g1887 685 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED 7 682 - -
Mal2g1887 685 Pfam Cyclic nucleotide-binding domain 469 556 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1887 Mal-Chr2 22809801 22813109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1887 12 679 Ion Channels AT3G48010 64.613 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1887 K05391 - gmx:100783672 1178.31