Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1885 ATGGAGATCCAAGTTAATGGTGGAACTGTAAGCCAGAAGGTGGACTATGCACAGAGTTTCTTTGAAAAGCAAATCCCAGTGGATGCAGTTTTCCAAAAAGATGAGATGATTGATATCGTTGGAGTAACTAAAGGTAAAGGTTATGAAGGTGTTGTAACTCGTTGGGGCGTCACTCGCCTTCCACGAAAGACTCACAGAGGTCTTAGGAAGGTTGCTTGTATTGGTGCCTGGCACCCTGCTCGTGTTTCTTTCACAGTTGCCAGGGCTGGTCAGAATGGATATCATCATCGTACGGAGCTGATAAGAAGATCTACAAGGTTGGCAAGACCAGCGAGGAGTCGCATACAGCCATCACTGAATTTGACAGGACTGAGAAGTATATTACTCCGATGGAGACATTAG 402 0.4552 MEIQVNGGTVSQKVDYAQSFFEKQIPVDAVFQKDEMIDIVGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELIRRSTRLARPARSRIQPSLNLTGLRSILLRWRH* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1885 133 Gene3D - 1 21 - -
Mal2g1885 133 ProSitePatterns Ribosomal protein L3 signature. 31 54 IPR019926 -
Mal2g1885 133 PANTHER 60S RIBOSOMAL PROTEIN L3-1 1 110 - -
Mal2g1885 133 SUPERFAMILY Translation proteins 1 99 IPR009000 -
Mal2g1885 133 Gene3D Ribosomal protein L3, domain 3 22 92 IPR044892 -
Mal2g1885 133 Pfam Ribosomal protein L3 1 107 IPR000597 GO:0003735|GO:0005840|GO:0006412
Mal2g1885 133 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 1 110 IPR045077 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1885 Mal-Chr2 22779290 22779795 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1885 1 109 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 85.321 4.41e-67 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1885 K02925 - dct:110092585 207.223