LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g1854	ATGGTGGAATCTTGGTTTTTTTTTGTGTTGATTGTGGTGGGTTACAGATGCTTCCGAGAGATTACTATTGAGATAGAAGGATACCCAATTGAGGATTTCGTTAGGAAGTTGCCAGGTCAACCTAAAGTTGAATTCGATCAATATGCTGGCTATATTGATATAGATGTAAAGCACGGAAGGAGCCTTTTCTATTATTTTGTTGAGGCTGACCATAACTCTTACAAAAAGCCCCTCACCCTTTGGCTCAATGGAGGTCCAGGATGTTCCGCAATTGGAGGAGGTGCATTTACTGAATTAGGTCCATTTTATCCTAGTGGTGATGGACGCAGTCTACGAAGAAATTCAAAATCTTGGAATAGAGTTTCCAATCTCCTCTTTGTGGAGTCTCCTGCTGGAGTTGGTTGGTCATACTCAAATACAACTTCTGAATATAATTATGATGACGCCTCCACATGGATAGAATTAAACTTTATGAGAACTAATTTATCTAATGATACACTTTTGTTCATGTTAAGATGGTACGAGAAGTTTCCTTCCTATAGATCAAGGGGGTTGTTTCTTACAGGAGAAAGCTATGCAGGACATTTTGTACCTCAGTTAGCTAATGTTATTCTTGATTATAATGCTCATCATTCGACCGATTTCAAATTTAATATAAAAGGAGTCGCTATTGGAAATCCACTTTTGCAAATGAGTCGTGATACACAAGCAACATATGAATATTACTGGTCACACGGAATGATTTCCGATGAAATTGGCCTTACCATTATGAATGATTGCAAAGTTGACGCAACTCAAGATAACTTATCTAAATCATGCAAAGATGCCAGGGTTGATGCTCAAGAAATTGTGAGCGAGTATATAGACAACTATGACGTGATTCTCGATAAGGTTCTCCATGCTAATTGTACCAATTTGTCGTATCCATGGTCTATGTGCAGCGATGTTTTAAATTACAATGTTACAGATCATGATATCAATATGCTTCCAGTTCTCAAACAAATAGTTCAAAACCATATTCCAGTATGGGTTTATACTTATAGTGGAGACCAAGATTCAGTTGTGCCATTACTAGGTTCTCGAAGACTCCTTCGTGAACTAGCTCATGACCTGAAGTTTAACATTACAGACTCATATAGAGCTTGGTTCCACAAAGGCCAGGTTGGAGGTTGGGTAACTGAGTATGGAAATTTGTTGACTTTCACCACTGTAAGAGGAGCAAGTCACATGGTATCATATAGTCAACCTTCTAGGGCGTTGCATCTATTTAGTTCCTTTGTACGTGGCAGAAGATTGCCAAAAACAAGAAGATTGCCAAAAACAACTTGA	1329	0.3837	MVESWFFFVLIVVGYRCFREITIEIEGYPIEDFVRKLPGQPKVEFDQYAGYIDIDVKHGRSLFYYFVEADHNSYKKPLTLWLNGGPGCSAIGGGAFTELGPFYPSGDGRSLRRNSKSWNRVSNLLFVESPAGVGWSYSNTTSEYNYDDASTWIELNFMRTNLSNDTLLFMLRWYEKFPSYRSRGLFLTGESYAGHFVPQLANVILDYNAHHSTDFKFNIKGVAIGNPLLQMSRDTQATYEYYWSHGMISDEIGLTIMNDCKVDATQDNLSKSCKDARVDAQEIVSEYIDNYDVILDKVLHANCTNLSYPWSMCSDVLNYNVTDHDINMLPVLKQIVQNHIPVWVYTYSGDQDSVVPLLGSRRLLRELAHDLKFNITDSYRAWFHKGQVGGWVTEYGNLLTFTTVRGASHMVSYSQPSRALHLFSSFVRGRRLPKTRRLPKTT*	443

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g1854	442	PANTHER	CARBOXYPEPTIDASE	7	296	-	-
	Mal2g1854	442	PRINTS	Carboxypeptidase C serine protease (S10) family signature	127	137	IPR001563	GO:0004185\|GO:0006508
	Mal2g1854	442	PRINTS	Carboxypeptidase C serine protease (S10) family signature	399	412	IPR001563	GO:0004185\|GO:0006508
	Mal2g1854	442	PRINTS	Carboxypeptidase C serine protease (S10) family signature	114	126	IPR001563	GO:0004185\|GO:0006508
	Mal2g1854	442	PRINTS	Carboxypeptidase C serine protease (S10) family signature	173	198	IPR001563	GO:0004185\|GO:0006508
	Mal2g1854	442	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	7	296	IPR001563	GO:0004185\|GO:0006508
	Mal2g1854	442	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	297	436	IPR001563	GO:0004185\|GO:0006508
	Mal2g1854	442	PANTHER	CARBOXYPEPTIDASE	297	436	-	-
	Mal2g1854	442	SUPERFAMILY	alpha/beta-Hydrolases	32	432	IPR029058	-
	Mal2g1854	442	Pfam	Serine carboxypeptidase	39	294	IPR001563	GO:0004185\|GO:0006508
	Mal2g1854	442	ProSitePatterns	Serine carboxypeptidases, serine active site.	187	194	IPR018202	GO:0004185
	Mal2g1854	442	Gene3D	alpha/beta hydrolase	28	432	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g1854	Mal-Chr2	22351424	22355768	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g1854	347	432	Calmodulin-binding Proteins	AT2G22960	31.395	1.34e-10	58.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g1854	K16297		-	gmx:100803335	627.476