Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1845 ATGTCAAACAATGCATTAAATTTTTTTATCTTGTTTCTCACTATCTCTTTGTTTCCATTCATTTCTTCTCTTAACCAAGAAGGTCTCTCTCTACTTTCATGGCTTTCAACTTTAAATTCCTCAAACTCTGTCACTACTACTACTACCTTCTCATCATGGGATCCAACTCACAAAAATCCTTGCAGATGGGACTATATAAAATGTTCTGCAGAAGAGTTTGTAGAAGAGATCATAATAACATCGATCGATCTTCGTAGTAAATTCCCTACACAGTTTCTTTCTTTTAACCACCTTACAACTCTTGTCATCTCAAATGGAAATCTCACAGGTGAGATTCCAAGTTCAGTTGGAAACTTGTCATCTCTAGTTACTCTTGATCTTAGCTTCAATACTTTAACAGGAACTATACCAGAAGAAATAGGAAAGTTATCTGAATTGAGATGGTTATCGTTGAATTCGAATTCGTTACACGGTGGAATTCCAACCACAATTGGTAACTGTTCAAAGCTTCAACAATTGACACTGTATGACAACCAACTTTCTGGTATGATTCCTGGAGAAATAGGACAGTTGAAGGCTCTTGAATCGCTACGAGCCGGTGGAAACCAAGGTATTTTCGGCGAAATTCCAATGCAGATATCAGATTGTAAGGCTTTGGTTTTTCTTGGACTTGCAGTTACTGGAATTTCCGGTGAGATTCCGGCAAGTATAGGAGAACTTCAAAATCTCAAGACACTTTCAGTCTACACAGCACATCTCACAGGTCAAATTCCACCAGAGATTCAAAACTGTTCAGCTTTGGAAGATTTGTTTCTGTATGAAAATCAGCTTTCTGGAAACATTCCTTATGAATTAGGTTCCATGCAAAGCCTCAAGAGGGTGTTGCTGTGGCAGAACAATTTCACTGGAACCATTCCAGAAAGTCTTGGAAACTGTACAAATCTGAAGGTTATTGATTTCTCTTTGAATTCTCTGATTGGTCAGTTACCTTTGTCTCTCAGTAATCTACTCTCATTGGAGGAATTTCTTGTGTCTGATAATAACATCTATGGAGAAATACCTTCATATATTGGCAATTTTTCCATGCTGAAGCAACTTGAATTAGATAATAACAAATTCACCGGTGAGATTCCACATGTTATGGGGAACTTGAAGGAACTCACTCTCTTCTTTGCATGGCAGAATCAATTACATGGAAGTATACCAACAGAGTTATCTAACTGTGAGAAACTTGAAGCAGTTGATCTCTCACACAATTTCCTCACTGGTCCAATTCCAAATTCTCTCTTTCATCTACAGAATTTAACTCAGCTGTTGCTGATATCAAACAGACTTTCAGGTCAAATTCCGCCTGATATCGGCAGGTCCACCAGCTTGATCAGGTTAAGACTGGGATCAAACAACTTTACCGGTCGAATTCCGCAAGAAATAGGCCTTTTGAGAAGTTTGAGTTTTCTAGAGTTGTCAGATAATCAACTCAGTGGAGATATTCCTTATGAGATAGGTAACTGTGCTCATTTAGAAATGCTTGACTTGCATAAAAATGAGCTTCAAGGAACCATTCCTTCCTCATTAAAATTCTTAGTTGGTCTCAATGTCTTGGATCTTTCTTCAAACAGAATAACTGGAACCATTCCCAAGATTTTTGGCGAACTTACATCGTTAAATAAGTTAATTCTAAGTGGAAACCTTATCTCTGGTTTGATCCCTCAGTCATTAGGCCTTTGTAAGGATTTGCAGTTGTTGGATTTAAGTAACAATAAGATTATAGGTTCTATTCCCAATGAGATTGGTTACTTGCAAGGATTGGATATCCTCTTGAACTTGAGTTGGAATTCTCTTACTGGTCCCATTCCAAAGACTTTCTCAAATCTCTCAAAACTTTCAATCTTGGACCTATCTTACAACAAGCTCACAGGTACCCTCATAGTACTTGGTAACCTTGACAATCTTGTGTCTCTAAATGTTTCCTACAATAGCTTTTCTGGTACTCTTCCTGACACAAAATTCTTCCAAGATCTACCTTCTGCTGCGTTTGCCGGTAACCCTGATCTTTGCATTAACAATTGTCATGCAAGTGGAAATCTCCAAGGGAACAAGTCAATAAGAAACATTATTATCTACACTTTCCTTGGTGTTATTTTAACTTCTGCTATTGTCACTTGTGGAGTTATTTTAGCATTAAGGATTCAAGGGGACAGTTATTATGGGAGTAATAGTTTTGATGAAGTTGAAATGGAATGGTCTTTCACTCCATTCCAAAAGCTTAACTTCAACATCAACGACATTGTAACAAAGTTGTCGGATTCAAACATTGTCGGAAAGGGTGTCTCGGGTGTTGTTTATCGTGTAGAAACTCCAACAAAACAGGTTATTGCAGTTAAGAAGCTATGGCCAGTAAAGAATGAAGAACCACCAGAGAGAGATTTGTTTACAGCAGAAGTTCAGACGCTTGGATCGATACGGCATAAGAATATAGTGAGACTTTTAGGATGCTGCGACAACGGAAGAACTAAAATGCTCTTGTTTGATTACATATGCAATGGTAGTTTATTTGGATTGCTCCATGAAAAGAGAATGTTCTTGGATTGGGATGCAAGGTATAAGATCATACTTGGAACAGCTCATGGTTTAGAATATCTTCATCATGATTGCATCCCTCCAATCGTCCATCGCGACGTTAAGGCTAACAACATCTTGGTAGGTCCACAGTTTGAAGCTTTTCTTGCAGATTTTGGCCTTGCAAAATTGGTCATTTCCTCAGAGTGTTCAAGAGCCTCACATGTAGTTGCAGGTTCTTATGGATACATAGCTCCTGAATATGGATACAGTTTAAGGATCACAGAGAAGAGTGATGTGTACAGTTATGGTATTGTGCTTCTTGAGATGATAACTGGAATGGAACCAACTGATAACAGGATTCCAGAGAGTGCTCACATTGTAACATGGGTTATCAGTGAAATCAGAGAGAAGAAAAGAGAATTCACATCTATTCTTGATCAGCAATTATTATTACAATGTGGAACAAGAACACCAGAAATGCTTCAAGTGCTAGGTGTAGCTCTTCTATGTGTGAATCCATCACCAGAAGAAAGACCTACAATGAAAGATGTAACAGCAATGCTCAAGGAGATTAGGCATGAAAATGATGATTTGGATAAACCAAATAAAGGCATGGTTGTTACTAATCCAAAAGCAGCAGTTCATTGTTCAAGTTTCTCAAGATCATGTGAACTTCTGATAGAATCATCATCATCTTCTTCATAG 3267 0.3796 MSNNALNFFILFLTISLFPFISSLNQEGLSLLSWLSTLNSSNSVTTTTTFSSWDPTHKNPCRWDYIKCSAEEFVEEIIITSIDLRSKFPTQFLSFNHLTTLVISNGNLTGEIPSSVGNLSSLVTLDLSFNTLTGTIPEEIGKLSELRWLSLNSNSLHGGIPTTIGNCSKLQQLTLYDNQLSGMIPGEIGQLKALESLRAGGNQGIFGEIPMQISDCKALVFLGLAVTGISGEIPASIGELQNLKTLSVYTAHLTGQIPPEIQNCSALEDLFLYENQLSGNIPYELGSMQSLKRVLLWQNNFTGTIPESLGNCTNLKVIDFSLNSLIGQLPLSLSNLLSLEEFLVSDNNIYGEIPSYIGNFSMLKQLELDNNKFTGEIPHVMGNLKELTLFFAWQNQLHGSIPTELSNCEKLEAVDLSHNFLTGPIPNSLFHLQNLTQLLLISNRLSGQIPPDIGRSTSLIRLRLGSNNFTGRIPQEIGLLRSLSFLELSDNQLSGDIPYEIGNCAHLEMLDLHKNELQGTIPSSLKFLVGLNVLDLSSNRITGTIPKIFGELTSLNKLILSGNLISGLIPQSLGLCKDLQLLDLSNNKIIGSIPNEIGYLQGLDILLNLSWNSLTGPIPKTFSNLSKLSILDLSYNKLTGTLIVLGNLDNLVSLNVSYNSFSGTLPDTKFFQDLPSAAFAGNPDLCINNCHASGNLQGNKSIRNIIIYTFLGVILTSAIVTCGVILALRIQGDSYYGSNSFDEVEMEWSFTPFQKLNFNINDIVTKLSDSNIVGKGVSGVVYRVETPTKQVIAVKKLWPVKNEEPPERDLFTAEVQTLGSIRHKNIVRLLGCCDNGRTKMLLFDYICNGSLFGLLHEKRMFLDWDARYKIILGTAHGLEYLHHDCIPPIVHRDVKANNILVGPQFEAFLADFGLAKLVISSECSRASHVVAGSYGYIAPEYGYSLRITEKSDVYSYGIVLLEMITGMEPTDNRIPESAHIVTWVISEIREKKREFTSILDQQLLLQCGTRTPEMLQVLGVALLCVNPSPEERPTMKDVTAMLKEIRHENDDLDKPNKGMVVTNPKAAVHCSSFSRSCELLIESSSSSS* 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1845 1088 Pfam Leucine rich repeat N-terminal domain 25 69 IPR013210 -
Mal2g1845 1088 Gene3D Transferase(Phosphotransferase) domain 1 846 1064 - -
Mal2g1845 1088 SMART serkin_6 767 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1845 1088 Pfam Leucine rich repeat 97 156 IPR001611 GO:0005515
Mal2g1845 1088 Pfam Leucine rich repeat 531 589 IPR001611 GO:0005515
Mal2g1845 1088 Pfam Leucine rich repeat 607 660 IPR001611 GO:0005515
Mal2g1845 1088 Gene3D Ribonuclease Inhibitor 29 144 IPR032675 -
Mal2g1845 1088 Pfam Protein kinase domain 770 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1845 1088 SUPERFAMILY L domain-like 226 570 - -
Mal2g1845 1088 ProSiteProfiles Leucine-rich repeat profile. 578 600 IPR001611 GO:0005515
Mal2g1845 1088 ProSiteProfiles Protein kinase domain profile. 767 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1845 1088 PANTHER LRR RECEPTOR-LIKE KINASE 3 1063 - -
Mal2g1845 1088 Gene3D Ribonuclease Inhibitor 231 327 IPR032675 -
Mal2g1845 1088 ProSitePatterns Protein kinases ATP-binding region signature. 773 801 IPR017441 GO:0005524
Mal2g1845 1088 SUPERFAMILY Protein kinase-like (PK-like) 764 1055 IPR011009 -
Mal2g1845 1088 SUPERFAMILY L domain-like 531 687 - -
Mal2g1845 1088 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 1063 - -
Mal2g1845 1088 Gene3D Ribonuclease Inhibitor 425 697 IPR032675 -
Mal2g1845 1088 Pfam Leucine Rich Repeat 410 432 IPR001611 GO:0005515
Mal2g1845 1088 PRINTS Leucine-rich repeat signature 531 544 - -
Mal2g1845 1088 PRINTS Leucine-rich repeat signature 625 638 - -
Mal2g1845 1088 SUPERFAMILY L domain-like 48 301 - -
Mal2g1845 1088 ProSitePatterns Serine/Threonine protein kinases active-site signature. 889 901 IPR008271 GO:0004672|GO:0006468
Mal2g1845 1088 SMART LRR_typ_2 119 142 IPR003591 -
Mal2g1845 1088 SMART LRR_typ_2 288 312 IPR003591 -
Mal2g1845 1088 SMART LRR_typ_2 648 681 IPR003591 -
Mal2g1845 1088 SMART LRR_typ_2 143 167 IPR003591 -
Mal2g1845 1088 SMART LRR_typ_2 336 360 IPR003591 -
Mal2g1845 1088 SMART LRR_typ_2 432 456 IPR003591 -
Mal2g1845 1088 SMART LRR_typ_2 480 504 IPR003591 -
Mal2g1845 1088 SMART LRR_typ_2 552 575 IPR003591 -
Mal2g1845 1088 SMART LRR_typ_2 528 551 IPR003591 -
Mal2g1845 1088 Gene3D Ribonuclease Inhibitor 145 230 IPR032675 -
Mal2g1845 1088 Gene3D Ribonuclease Inhibitor 328 424 IPR032675 -
Mal2g1845 1088 Gene3D Phosphorylase Kinase; domain 1 738 845 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1845 Mal-Chr2 22271665 22275193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1845 23 1078 Receptor kinase-like Gene Family AT5G56040 46.415 0.0 908
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal2g1845 Pkinase 3.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1845 - - gmx:100807225 1737.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1845 2 22271665 22275193 Mal2g1845 2 22271665 22275193 ECH