Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1834 ATGGAAAAACAGAGTATCCTATGCAAATACACAGAACATGAAACTGTTACAAAAAAACTCATCACAACAAAGAAAAATGGTCACAACAACAACACAACCATAAACCCAAGAGTTGTCAGAATATCTTTTACCGACCCAGATGCAACCGACTCATCCAGCGATGAAGAAGGCCAAAGACAAACCTTCAAAAACAGAACAAAACGCTATGTAAACCGTATTGAAATTGAAACAACCGCAAAAGCGGTTGTTAACAGAAAAAGACCCGCCGGAGAAACAACAACCGTTCGACGGCCGGCGAAGATTCCGGCAGTCAACAACGGTAAAAAGTTCCGTGGTGTACGGCAGAGACCATGGGGAAAATGGGCTGCTGAGATTCGAGATCCTGCTCGGAAGGTGAGGCTCTGGTTGGGAACATTTGAAACTGCTGAAGAAGCTGCCATGGTTTACGACAATGCCGCGATTAATCTTCGTGGCCCAGACGCTTTAACAAACTTCCTCACACCGCCGCAGAAAGAAACTCCGGTAGAACAACCCTCCGCCGTGAAGCCAGAAATGAAGGTAATTGTTGACGCCGATGTTGAAGCCGAAGCTTCTGGGTTTGGTAACTCTGGTTATGATTCCGGTGAGGAACGTTGTGTTCCACTTTCTTCTCCAACTTCGGTATTAAATTTCCGGAGTAACTCCGGCGAATCACAAGAATCAGAAGAACGCAGTCAAAGTGAAGCTTGTGGAGTGTTTAGAGAATGTCAAGGTGAATCAAATCTGTTCGATGAAACTGCGTCGTTTTTTCAACATGATATGCCTTCTTGGGATGATGTGTTCAACTTTGAAACTCCAGAGTTTCCTTTGATGTTTGAAGAAGAACAGAGTGAAATGTTGTTTGGAGAAAATACAACACCGTTTTTGTTTGATGAAGATTTAAGTGCCAGCATTGTTCTTGCTGACTCACTCATAGATTTTGACAAAGCATGTTTTCCTTCACCTTCTCCTCCTTCTTCATCGTTATGCCAAGTGGATGATTTCTTTCAAGACATTTTGTTAGGCTCAGATCCTCTTGTTGTGCTTTGA 1068 0.4326 MEKQSILCKYTEHETVTKKLITTKKNGHNNNTTINPRVVRISFTDPDATDSSSDEEGQRQTFKNRTKRYVNRIEIETTAKAVVNRKRPAGETTTVRRPAKIPAVNNGKKFRGVRQRPWGKWAAEIRDPARKVRLWLGTFETAEEAAMVYDNAAINLRGPDALTNFLTPPQKETPVEQPSAVKPEMKVIVDADVEAEASGFGNSGYDSGEERCVPLSSPTSVLNFRSNSGESQESEERSQSEACGVFRECQGESNLFDETASFFQHDMPSWDDVFNFETPEFPLMFEEEQSEMLFGENTTPFLFDEDLSASIVLADSLIDFDKACFPSPSPPSSSLCQVDDFFQDILLGSDPLVVL* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1834 355 MobiDBLite consensus disorder prediction 199 241 - -
Mal2g1834 355 Pfam AP2 domain 109 158 IPR001471 GO:0003700|GO:0006355
Mal2g1834 355 MobiDBLite consensus disorder prediction 213 229 - -
Mal2g1834 355 CDD AP2 108 165 IPR001471 GO:0003700|GO:0006355
Mal2g1834 355 Gene3D AP2/ERF domain 108 167 IPR036955 GO:0003700|GO:0006355
Mal2g1834 355 MobiDBLite consensus disorder prediction 25 39 - -
Mal2g1834 355 PRINTS Ethylene responsive element binding protein signature 110 121 IPR001471 GO:0003700|GO:0006355
Mal2g1834 355 PRINTS Ethylene responsive element binding protein signature 132 148 IPR001471 GO:0003700|GO:0006355
Mal2g1834 355 SUPERFAMILY DNA-binding domain 109 166 IPR016177 GO:0003677
Mal2g1834 355 MobiDBLite consensus disorder prediction 25 62 - -
Mal2g1834 355 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-LIKE 7 346 - -
Mal2g1834 355 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 7 346 - -
Mal2g1834 355 ProSiteProfiles AP2/ERF domain profile. 109 166 IPR001471 GO:0003700|GO:0006355
Mal2g1834 355 SMART rav1_2 109 172 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1834 Mal-Chr2 22116595 22117662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1834 8 230 AP2-EREBP Transcription Factor Family AT4G27950 46.352 2.53e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal2g1834 AP2 4.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1834 - - adu:107460630 366.696