Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1831 ATGGATGAGAGCATATATGATATTTTTGAAGACAGAACAGATGATGATCTCTTTGCTATTTTGGAGAGTCTAGAAGACTTCACTGATTTTCCTCTCATCAAAGAAGCTGAAGCTGCTACTCCAAAAGAGAATGAGGATAGTTCAAACTCAAGATTGGTTTCTCAAAAATCAACTTCTTCATTACAAGATTCTGAAACTGAACTTGAAACTGAACCAAAAAGAAAGAGACAGAAGCTTACACCAACTATGCTTGAGGAACAGATAAACAGTGTTGATGGACAACAAAGGGTTTCTCACATTACCGTTGAGCGCAACAGAAGAAAGCAAATGAATGAGCATTTGTCTGTTTTAAGGTCACTTATGCCTTGCTTTTATGTCAAAAGGGGAGATCAAGCATCAATAATTGGAGGTGTGGTTGATTACATAACCGAGTTGCAACAACTACTCCAAGCCCTTGAAGCCAAGAAACAAAGAAAAGTATACAGTGAAGTACTAAGTCCACGATTAATTCCAAGTCCAAGACCTTCACCATTAAGTCCAAGAAAACCACCTCTAAGCCCAAGACTAAACTTGCCAATTAGTCCTAGAACTCCACAACCTGGTAGCCCTTACATGCCAAGATTGCAACAAAGCTACATTGCACTTTCACCTCTTGATCCATCTCCTACTACTTCTTCCTCTGCTTCCTCTGTCAATGATAACATCAATGAGCTTGTTGCTAATTCAAAGTCTCATATTGCTGATGTTGAGGTCAAGTTTTCAGGTCCTCATGTTCTTTTGAAAACTGTTTCTCAACGAATTCCAGGACAAGCTTTGAAGATTATTTCTGCACTTGAAGACCTTGCACTTGAAATCCTCCATGTTAACATTAATAGTACTTCTGATGATACCATGTTGAACTCTTTCACTATTAAGATTGGAATTGAATGCCAACTGAGTGCTGAAGAACTTGCTCAACAAATCCAGCAAACATTCTGCTAA 981 0.3843 MDESIYDIFEDRTDDDLFAILESLEDFTDFPLIKEAEAATPKENEDSSNSRLVSQKSTSSLQDSETELETEPKRKRQKLTPTMLEEQINSVDGQQRVSHITVERNRRKQMNEHLSVLRSLMPCFYVKRGDQASIIGGVVDYITELQQLLQALEAKKQRKVYSEVLSPRLIPSPRPSPLSPRKPPLSPRLNLPISPRTPQPGSPYMPRLQQSYIALSPLDPSPTTSSSASSVNDNINELVANSKSHIADVEVKFSGPHVLLKTVSQRIPGQALKIISALEDLALEILHVNINSTSDDTMLNSFTIKIGIECQLSAEELAQQIQQTFC* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1831 326 MobiDBLite consensus disorder prediction 168 206 - -
Mal2g1831 326 MobiDBLite consensus disorder prediction 66 81 - -
Mal2g1831 326 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 93 166 IPR036638 GO:0046983
Mal2g1831 326 MobiDBLite consensus disorder prediction 170 202 - -
Mal2g1831 326 SMART finulus 100 151 IPR011598 GO:0046983
Mal2g1831 326 Coils Coil 138 158 - -
Mal2g1831 326 Pfam Helix-loop-helix DNA-binding domain 95 146 IPR011598 GO:0046983
Mal2g1831 326 CDD bHLH_AtFAMA_like 98 168 - -
Mal2g1831 326 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 94 145 IPR011598 GO:0046983
Mal2g1831 326 PANTHER TRANSCRIPTION FACTOR FAMA 1 326 IPR044283 GO:0003700|GO:0010052
Mal2g1831 326 PANTHER TRANSCRIPTION FACTOR SPEECHLESS 1 326 - -
Mal2g1831 326 MobiDBLite consensus disorder prediction 45 65 - -
Mal2g1831 326 Gene3D - 85 159 IPR036638 GO:0046983
Mal2g1831 326 MobiDBLite consensus disorder prediction 35 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1831 Mal-Chr2 22065931 22067979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1831 1 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G53210 53.352 1.25e-93 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal2g1831 HLH 1.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1831 K20558 - gmx:100777437 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g5107 3 131213250 131216190 Mal2g1831 2 22065931 22067979 PCT