Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1815 ATGACTTTTCACCAAGATAAATTTGTTAGATTTCAGGACTGGAATTCAGAGGTTAACTCTCCCGGAATAGTTCACGTAACGCAATCAGGGAGAATTAAAACTACACTCAAATCAGTTTCCAGCAAGTTTCAAAGGGGCTTCGAATCTAGTTCGGAGAGGATAAAGGGATTTGCAAAAAAACCTTTCAAATCTTTTTCCAAGAACAGTATTCTTACTAAACGTTTTAGTTCTAGAAATAAAATTCTCGACCCGCAGGGTCCTTTTCTTCAAAAGTGGAACAAAATATTTGTGTTATCATGTCTTATTGCTGTATCGATTGATCCTTTGTTCTTCTATATCCCTGTGATTGATGATGGCAAGAAATGTCTTTCACGGGACAAAAAAATGGAAACTACGGCAACTGTTTTAAGGTCCTTCTCCGACATTTTTTATATTATTCATATAATTTTCCAGTTTCGTACTGGATTTATTGCTCCCTCTTCTCGAGTATTTGGAAGAGGTGTGTTGGTTCAAGATGCTTGGGCAATAGCAAAGAGATATATGTCATCATACTTCTTAGTTGACATTCTTGCCGTTCTTCCCCTCCCACAGGTGGTGATTCTATTTATCATTCCAAAGATGACAGGCTCAGAATCACTGAACACGAAAAACTTGCTGAAATTTATTGTCTTCTTCCAATATGTGCCACGGTTTATACGAATAGCTCCACTATATAAAGAGGTTACAAGGACCTCTGGCATTCTCACTGAAACAGCATGGGCTGGAGCTGCATTCAATCTCTTTCTTTACATGCTTGCAAGTCATGTTCTTGGTGCCTTTTGGTACTTGTTTTCTATAGAAAGAGAAACCACATGCTGGCAAAATGCATGTCGGAAAAATACCACTTGTATAAAGGCAGAAATGTATTGCGATGATCATCATGGTTTGAGCACAATTTCAACATTCCTGAATGCTTCATGCCCAATACAGAATCCAAATAAAACACTCTTTGATTTTGGAATTTTCCTTGATGCCCTTCAATCTGGAGTTGTGGGTTCGACAGACTTCCCACAGAAATTTTTTTATTGTTTTTGGTGGGGCCTAAAGAATTTGAGTTCTCTTGGTCAGAACCTGGCAACAAGTACCTTTGTTTGGGAAATCTGCTTTGCAATTTTCGTTTCCATTGCTGGTTTGGTATTATTTGCGTTCCTCATTGGAAATATGCAGACATATTTGCAGTCAACAACTACGAGATTGGAGGAGATGAGAGTGAAAAGGAGAGATGCGGAACAGTGGATGTCTCATCGACTACTCCCTGACCACTTGAGAGAAAGAATCAGACGACATGAGCAATACAAATGGCAAGAAACTAGAGGAGTTGATGAAGACAATTTGATCCGTAATCTTCCCAAGGATTTAAGAAGGGACATTAAGCGTCATCTCTGCTTGGCTTTGCTGATGAGGGTGCCAATATTTGAGAAGATGGATGAGCAACTTTTGGATGCAGTGTGTGATTGTCTCAAACCAGTACTTTACACGAAAGAAAGCTGCATTGTTCGCGAAGGAGATCCTGTTGATGAGATGCTCTTCATAATGCGCGGTAAACTACTGACCGTGACAACAAACGGTGGAAGAACAGGTTTCTTTAACTCTGAATACCTCAAGGCTGGTGACTTTTGTGGAGAGGAGCTTCTCACATGGGCATTAGATCCTCGTTCCTCGTCCAACCTTCCCATCTCAACCAGGACTGTCCAAACTCTTTCAGAAGTGGAAGCATTTGCTCTAAAAGCTGAGGATTTGAAGTTTGTTGCATCTCAATTTCGGCGCCTTCACAGTAAGCAACTTCGCCACACTTTCAGATTTTACTCGCAACAATGGCGTACATGGGCTGCATGTTTCATACAAGCAGCATGGAGGCGCTATTGTAAAAAGAAGCTTGAAGAGTCTCTAAGGGCAGAGGAGAATAGGCTCCAAGATGCATTGGCCAAGGAAGGTGGTAGCTCACCTGGCCTAGGTGCCACAATATATGCGTCAAGATTTGCTGCTAATGTGCTTCGAGCTATACGTAGAAATGGCTCAAGAAAGCCCAGGGTGCCAGAGAGACTACCTCCCATGATGCTCCAGAAACCTGCTGAACCTGATTTTACTGCTGAAGAGCAATAG 2142 0.4136 MTFHQDKFVRFQDWNSEVNSPGIVHVTQSGRIKTTLKSVSSKFQRGFESSSERIKGFAKKPFKSFSKNSILTKRFSSRNKILDPQGPFLQKWNKIFVLSCLIAVSIDPLFFYIPVIDDGKKCLSRDKKMETTATVLRSFSDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVQDAWAIAKRYMSSYFLVDILAVLPLPQVVILFIIPKMTGSESLNTKNLLKFIVFFQYVPRFIRIAPLYKEVTRTSGILTETAWAGAAFNLFLYMLASHVLGAFWYLFSIERETTCWQNACRKNTTCIKAEMYCDDHHGLSTISTFLNASCPIQNPNKTLFDFGIFLDALQSGVVGSTDFPQKFFYCFWWGLKNLSSLGQNLATSTFVWEICFAIFVSIAGLVLFAFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDHLRERIRRHEQYKWQETRGVDEDNLIRNLPKDLRRDIKRHLCLALLMRVPIFEKMDEQLLDAVCDCLKPVLYTKESCIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPRSSSNLPISTRTVQTLSEVEAFALKAEDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYCKKKLEESLRAEENRLQDALAKEGGSSPGLGATIYASRFAANVLRAIRRNGSRKPRVPERLPPMMLQKPAEPDFTAEEQ* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1815 713 Coils Coil 636 656 - -
Mal2g1815 713 SUPERFAMILY Voltage-gated potassium channels 83 406 - -
Mal2g1815 713 SMART cnmp_10 484 615 IPR000595 -
Mal2g1815 713 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 711 - -
Mal2g1815 713 CDD CAP_ED 484 615 IPR000595 -
Mal2g1815 713 Gene3D Jelly Rolls 482 602 IPR014710 -
Mal2g1815 713 Gene3D Helix hairpin bin 410 475 - -
Mal2g1815 713 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 6 711 - -
Mal2g1815 713 Pfam Cyclic nucleotide-binding domain 504 595 IPR000595 -
Mal2g1815 713 SUPERFAMILY cAMP-binding domain-like 413 606 IPR018490 -
Mal2g1815 713 Gene3D - 95 408 - -
Mal2g1815 713 MobiDBLite consensus disorder prediction 685 713 - -
Mal2g1815 713 ProSiteProfiles cAMP/cGMP binding motif profile. 484 568 IPR000595 -
Mal2g1815 713 Pfam Ion transport protein 92 411 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1815 Mal-Chr2 21768253 21775326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1815 1 712 Ion Channels AT5G53130 78.860 0.0 1156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1815 K05391 - gmx:100817516 1252.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4030 3 118948087 118951782 Mal2g1815 2 21768253 21775326 PCT