Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1807 ATGAACACTTTCAATCCCATACTCATCCTAATTTGTTTCATTTTGCTCTTCAACCCTCATCAAACAGTGGTACAAGCAACCAAAGAATTAGAAACATGCTTAGACACTGTTTGCCACACAAATCAGCCACTAATCCGATTCCCATTCCATATAGAAGGAAAACAACCAAAGACATGTGGATACCCTGGCTTCAAAGTATCATGCAATGAAAATGAAAAAAGCCAAACACTCCTTAATCTACCTTATATGGAAAAACTTAGTATCAAAAAAATAAACTATGCCAAACAAGAAATTTTGGTAAATGATCCAAATAACTGTCTCCCAAAACAACTTCTTTCACTCAACCTCTCTGCCTCTCCTTTTGATGCTGTTTACTACCAACAATTTACCTTTTTTAACTGCTCATTCAACTTGGAATACCTTACCTCTAGGTACAAACCAATAACTTGTCTTAGTGATTATTCCAAGTACAAAATTTTTGCAACACCGTCACTTACGGTGTATGTGCATTTGTTGTCTGTTTGTGATTTGATTGACACCGTGAACGTGCCCGTTCGATCACCGTTTTTTGATCAAGTGTTGTCTTCTGAACTCATTGATGATCTCCGGTTGTCGTGGAATTCGCCGCCGTGCGGTAGGTGTGAGTCTCATGGTGGACGATGTGGGTTCCAAGTTAACTCCACTTTTGAAATTGCTTGTTACAATGTCCCTCCACGACAAGGAATTTCCCGTGGTGCAAGTTATCTCATAGCAATATGTGTAGGTGTGCCAACTTTGTTGTGCTTCATTTCAATATTAAGCTGGATATGCAGCAGGTTCAGATTTGGGACCCATGGTTGGGCTTGGGCTTGGGCCCGTGAGACAGTTGCAGATTTTGAGCCACTTCTTGATCATCAACAATGCACCAACATTTCAGGTCTTGATAAGCCTACAATTGAATCTTACCCAAAAATAGTTATAGGTGATGTCATACACTTACCAAAACCTAATGGTAAGACATGTCCAATATGCTTGTCAGAATATATGCCTAAAGAGACAGTGAAAACTATGCCTGAATGTGAACATTGCTTTCATGCACAATGCATTGATGAATGGCTTCCATTGAATGCGTCCTGCCCAATTTGTAGAACTTCTCCTTCAAGGTTACCATCACAAGCTAGGGCTGGATCATATGACCATAATGCTTAA 1188 0.3981 MNTFNPILILICFILLFNPHQTVVQATKELETCLDTVCHTNQPLIRFPFHIEGKQPKTCGYPGFKVSCNENEKSQTLLNLPYMEKLSIKKINYAKQEILVNDPNNCLPKQLLSLNLSASPFDAVYYQQFTFFNCSFNLEYLTSRYKPITCLSDYSKYKIFATPSLTVYVHLLSVCDLIDTVNVPVRSPFFDQVLSSELIDDLRLSWNSPPCGRCESHGGRCGFQVNSTFEIACYNVPPRQGISRGASYLIAICVGVPTLLCFISILSWICSRFRFGTHGWAWAWARETVADFEPLLDHQQCTNISGLDKPTIESYPKIVIGDVIHLPKPNGKTCPICLSEYMPKETVKTMPECEHCFHAQCIDEWLPLNASCPICRTSPSRLPSQARAGSYDHNA* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1807 395 Pfam Wall-associated receptor kinase galacturonan-binding 33 102 IPR025287 GO:0030247
Mal2g1807 395 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 10 386 - -
Mal2g1807 395 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 10 386 - -
Mal2g1807 395 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 295 380 IPR013083 -
Mal2g1807 395 SUPERFAMILY RING/U-box 314 381 - -
Mal2g1807 395 SMART ring_2 334 375 IPR001841 -
Mal2g1807 395 Pfam Wall-associated receptor kinase C-terminal 190 234 IPR032872 -
Mal2g1807 395 Pfam Ring finger domain 333 376 IPR001841 -
Mal2g1807 395 ProSiteProfiles Zinc finger RING-type profile. 334 376 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1807 Mal-Chr2 21695390 21697528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1807 31 380 C3H Transcription Factor Family AT2G46495 34.746 2.10e-64 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1807 - - gmx:100818969 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4033 3 118976269 118977853 Mal2g1807 2 21695390 21697528 PCT