Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1773 ATGGATATTTCACCATTTGATGATTTCATTGGGTTTGATTGGGCAACTCATTTTTTATACCAAAGTAACCAACTTTACATGAATGAATTCAAGGATCTTGAAAATTTCAACCTCCCACACCTTGATCAAAATAATTTTGAGGTTGATCAAAAACCCCTCAATGTTGTCTTGCCTGAATCGGAGCATGGTGAGAGTGGTCTTTTCAAAGTTGATTCAGAGAAAACTGAAAATGAGGTTGTGAGTTTTGTAAAGAAAAAAGATGAAGGGGAAACTCAAGCGTTGTCATTGCCTAGTAGTAAGAAGAATATGTCATCATTATTAGAGTATGATGAAATAAAGAAACATTTTGATGTACCTATAACTATGGCTGCTAAGAAAATGAATATTGGGGTGACCCTTTTGAAAACAAGATGCAGGGAGCTCAAAATCACTAGGCGGCCTTACAGAAAATTAAGGAGCTTCACTGTGCTCATCAACAACCTTAAGGAAATGGGTTTGGCAAAGGAGGTTGCCCTGTTGGAGAAGCAAAGAAAGATGTTGGAGAAACTTCCTGAAATGGAATTGAATGAAGAAATCAAGAAGCTGAGGCAAGCTTGTTTTAAAGCTAAATACAAGAAGAGAAGATTTATTACCCTCAATCCTTGA 645 0.3659 MDISPFDDFIGFDWATHFLYQSNQLYMNEFKDLENFNLPHLDQNNFEVDQKPLNVVLPESEHGESGLFKVDSEKTENEVVSFVKKKDEGETQALSLPSSKKNMSSLLEYDEIKKHFDVPITMAAKKMNIGVTLLKTRCRELKITRRPYRKLRSFTVLINNLKEMGLAKEVALLEKQRKMLEKLPEMELNEEIKKLRQACFKAKYKKRRFITLNP* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1773 214 Pfam RWP-RK domain 107 153 IPR003035 -
Mal2g1773 214 PANTHER PROTEIN RKD1-RELATED 50 210 - -
Mal2g1773 214 PANTHER PROTEIN RKD4 50 210 IPR044607 GO:0003700
Mal2g1773 214 ProSiteProfiles RWP-RK domain profile. 90 176 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1773 Mal-Chr2 21298966 21299809 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1773 107 208 AtRKD Transcription Factor Family AT5G53040 55.882 6.34e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mal2g1773 RWP-RK 2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1773 - - aprc:113850801 224.172