Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1768 ATGGATAGTAGTAATGCTATAGACAGCAGCAACAATGTAAGAAATTTTGATTTGAATGAATGTCCGATGGAAGATATTTCTCCGGTAAATGATTATTCAGAGAGAAATGAGTTTTTAGAAGGTGATATAATTGAAAGTGCAGAGAAAGAAAATATTGTATCCTCTAATCAAAATATTGAGATAAATGAGTTTTTAGAAGAAGTTGATAATGATGGAACTTGTAATGAGACAAATACTCTTCCTTTTGTTGGTCAAATTTTTCTTAGTGAAGAAGAAGCATTTGTCTTTTATAAGAGATATGCATATCAACATGGGTTCTCGATTAAAAAAGGTAGATTCATCACACAAAATGGAATTATTACCAGACGTGATTTTTTTTGCCATCGTGAAGGTAAAGTCTCCTTGAAAATCATAGATCCATCAAAAGAACAGAGAAAAAGAGAAACATCAAAGTGTGAATGTAAAGCTCATTTACGAATTTTGTTACAAAAGTCTCATGATATATTTTCAAGTGAGTGGCGAGTTACAAAGTTTGTTGCTGAACATAACCATGATTTGCTAACCCAATCAGAGGTGCGCTTTTTACCGGCTTATCGGACTATCTTACAAGATGATTATGAACGCATTTTCTTATTAAAAGAAGGAGGGCTTTCAGTTAGACAAATAATGCGTGTCATAGAACTAGAGAAAAATGTGAAGCATGGTTATCTTCCATTTATTGAGAAGGACATTCGCAATCTTTTTTTGAAAGCTAATAAAAAAGTTGAAAGAAGTGATGTTATGGATTTTCTGAAGTATTGTGAGGATACAAAAAAGAATTGTCCCAAATTTCAGTATGCTTATACTCTTGATGAAGAAAGAAGGTTAGAGAATATTTTTTGGTCTCCTGCTTCTTGTTTTGATTGGTACCAAAAATATGGTGATGTTGTTGTGTTTGATACTACATACAAGGTCAATTCTTATGAAATGCCGTTTGGGATTTTTGTGGGTATGAATGGTCATGGAAAGACTATACTTTTTGGATGTGCACTCTTACGGAATGAAACGTTGTATAAGTTGGAGACACATGAAGAATTTGAGCATCAATGGCCGGAAGTTGTTGCTAAGTATAACTTGCAGTCAAATAAACATGTGAAAGGGTTGTATGAAATCAGAAATTATTGGGCACTAGCTTATCTTCGTGACCATTTCTTTGGTGGGATGACAACCACCGGAAGATCAGAGAGTATTAATGCATTTATCAAAAGATTCATTGATTCTCACACAAGTTTAAGTGACTTTGCAAAACAGGTTGATATTGCAATTGAGGATATTAAGCAAAAAGAAGAGCATGATATAATGTTAGAAAAGTGCAAGGGATCAAATATGAAGTTGATGTCACCCTTACAAGAGCAAGCTCATAGTGTTCTCACACGTATTGCTTTTAAGAAATTTCAAGAGGAGTTTGAAAGGTCCATTCAATATTCAATTCATAGTGAAAATGATAATATGTTTGTGTTGCAGTATTATAAAGATGGTAATAGCAAAAAACATGTAGTCTTTTGGGATGGTAAAATAGCTACATGTAGCTGCAAGAATTTTGAATTTTGGGGGATATTATGTCGTCATATTCTCAGTATTTTTCTTCATAAAGATTGCCATGAAATTCCTTCTAACTACTTGCCATCACGGTGGCGGCTTCAAGCACCACACAACGATGATGAAATTGAGCCCCAAGGTAATGTTGTCATTGAGGAAGAAGTAATTGATTGCAACAATGAAGTTCATTGTCATCCAAAGTCTAAACCAAAAGGTCGTCCTAAACGAAGACGTCTTAAAGGTGGAAAAGAGTTACCACATAGCACGAACACGTGTGGATTATGCAAAGGTGTAGGGCATAACATTGTTACATGTCCTCTAAATGAAAAGAAGAAGAATAACAAGAAGAAGAAGAAAGCTTGTGAAGATGCAAATTTAAACCCAATTCTTCTTTCAAAAGTTTAG 1983 0.3409 MDSSNAIDSSNNVRNFDLNECPMEDISPVNDYSERNEFLEGDIIESAEKENIVSSNQNIEINEFLEEVDNDGTCNETNTLPFVGQIFLSEEEAFVFYKRYAYQHGFSIKKGRFITQNGIITRRDFFCHREGKVSLKIIDPSKEQRKRETSKCECKAHLRILLQKSHDIFSSEWRVTKFVAEHNHDLLTQSEVRFLPAYRTILQDDYERIFLLKEGGLSVRQIMRVIELEKNVKHGYLPFIEKDIRNLFLKANKKVERSDVMDFLKYCEDTKKNCPKFQYAYTLDEERRLENIFWSPASCFDWYQKYGDVVVFDTTYKVNSYEMPFGIFVGMNGHGKTILFGCALLRNETLYKLETHEEFEHQWPEVVAKYNLQSNKHVKGLYEIRNYWALAYLRDHFFGGMTTTGRSESINAFIKRFIDSHTSLSDFAKQVDIAIEDIKQKEEHDIMLEKCKGSNMKLMSPLQEQAHSVLTRIAFKKFQEEFERSIQYSIHSENDNMFVLQYYKDGNSKKHVVFWDGKIATCSCKNFEFWGILCRHILSIFLHKDCHEIPSNYLPSRWRLQAPHNDDEIEPQGNVVIEEEVIDCNNEVHCHPKSKPKGRPKRRRLKGGKELPHSTNTCGLCKGVGHNIVTCPLNEKKKNNKKKKKACEDANLNPILLSKV* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1768 660 Pfam MULE transposase domain 309 350 IPR018289 -
Mal2g1768 660 Pfam SWIM zinc finger 512 544 IPR007527 GO:0008270
Mal2g1768 660 ProSiteProfiles Zinc finger SWIM-type profile. 498 545 IPR007527 GO:0008270
Mal2g1768 660 SMART 26again6 520 547 IPR006564 GO:0008270
Mal2g1768 660 Pfam FAR1 DNA-binding domain 96 187 IPR004330 -
Mal2g1768 660 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 349 559 IPR031052 GO:0006355
Mal2g1768 660 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 45 351 IPR031052 GO:0006355
Mal2g1768 660 MobiDBLite consensus disorder prediction 594 608 - -
Mal2g1768 660 Coils Coil 633 653 - -
Mal2g1768 660 MobiDBLite consensus disorder prediction 591 611 - -
Mal2g1768 660 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 349 559 - -
Mal2g1768 660 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 45 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1768 Mal-Chr2 21211822 21213922 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal2g1768 FAR1 5.9e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1768 - - mtr:MTR_4g035820 596.66