Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1759 ATGGGTAGTTTCATTGGAGATGACGATTGTCGGTTTTTTAATGCTGAAGAGGATCTTGTGTCTATTAGGGATGCAAATTCTGATGATGATGATGATGATGATGATGATGATGAGAAAGGGGTGTCTGTGTCTGTTGATTTTGATTATGAACTGTGGATTAGGAGTCCAAAGAGTGTGAGAGAGCGTAGGGGGAAGTTTATGAAGAGCATGGGAATGAGTTTAGATGGAATTGTGGTTGAAAATTCATTAGATTTTGAGAAGGAAGAGATTTTGGAAAGAGGAAAAGATATTAGTAGTTCTGAAGAGGACTTCAGTTCATGTCGGTTGTCAATGTCTTGTTGCTCTAGTGTGAGTTCATCAGAGGAGTTTGATTTAGTGGATAATAACTTGCCGTTTCAAGATGGGAATTTGGAGAAAGGAATGAGGGATAATGAGAAGACGAGTGATTGTTCAAATCAGTTGGTAATTGCTAAGGAATCCGAGGATTGTGTGAATGTCTCTGTGGTGTCTCCTTTTCAAGGATTGGTAGATAGGGAGTTTGAGGATACAGATGGCGATGTGGTTACTAGAACGATAAATAGGGCGAGAAGGGGTTGGTTGAGAAGATTGAGATCAATGACGTGCATGGTTGATAATGGTACAGAAGAAGGGAGTTATGCAGTCTCAGGGTGTAGGCTTCGGAAAGTAAAGGTCCGTCAATGCAGGAAGAAAATGAAGGAACTTTCATCACTTTACTTGAGGCAAGATATCCAAGCGCATGAAGGTTCGATTTTGGCCATGAAATTTAGTCCTGATGGGCAGTATCTGGCCACTGGTGGTGAAGATGGGGTTGTTCGGGTGTGGCAAGTGGTTGAGGAGGAAAGATGTAATGAAATTCACATTCCAGAAATTGACCCCTCAAGCATTTATTTTACGGTGAATAAGCTCTCTCAATTGAAACCGTTGTTTATGGATAAAGAAAAACTGAAGAACATGAGAACAACATCAGATTCAGCTTGTGTCGTTTTCCCGCCCAAGATCTTCCGGTTGTTAGAAAAACCACTGCGTGAGTTCCATGGCCATAGAAGTGAAGTTTTGGATCTCTCCTGGTCAAAGAAGAATTATCTTCTTTCGTCTTCAGTTGACAAAACTGTCCGACTATGGCAAGTGAATCATGACCTTTGCTTGAAAGTGTTTTCACACAGTAATTACGTGACATGCATACAATTCAATCCTGTTGATGATGATTATTTCATTAGCGGATCCATAGACGGAAAAGTGCGCATCTGGGCAATTTCTGATTGTCAGGTTGTTGATTGGACTGATGTCAGAGATATAGTGACTGCAGTATGTTATCGGCCTGATGGGCAGGGAGGAATTGTTGGCTCTTTGGCAGGAAATTGTCGGCTTTATAAAATATCAGATAATCACTTGCAGTTGGATTCCCAACTATGCTTAATTGGTAAAAATAAAAAGAAACTTCCTGGCAGAGGGATAACTAGCTTTCAGTTTTTTCCTGAAGATTCTAACAAAGTTATGGTTACCTGTGCTGATTCACAAGTGAGAATCCTTGATGGGAATAATGTGATTTGCAAATACAAAAGCCTTAACACAGGGAGTCCAATGTGTGCATCGTTTACTTCAGACGGGAAACATATTTTATCGGCATGCGAGGACTCTAATGTATATCTATGGAACGTTGATCAGGAAGAGTCTAATCCCATGAAATCTAAGAAGATTAGGTCTTGTGAGCGGTTTTCCTCAAATGCATCCGTTGCAGTGCCTTGGCACGGTTTGAAACCTCAAATTACTGAAAATGAACAATTGAATGTCATGGTTAAAAAATCACCTCAAGTTGCTATGCAATTACACCCAAATCCACCTGCTTCTTTCTCTCTGGGCCAAGAGTTTTTCTTGGAGTCCTTTCCGAAGGGATCTGCAACCTGGCCCGAGGAGAAGCTTCCTGTTTCGAGCTCCAAGACTAAAAAAACATCATTGATACGGAATTCCGAATACAAGTTCTTGAAATCTTCCTGCAAGAGTACCAACCGCACTCATGCGTGGGGTATGGTCATTGTGACTGCAGGCTGGGACGGGAGGATAAAATCATTCCAAAATTATGGGCTACCTATACCCGTTTGA 2121 0.4125 MGSFIGDDDCRFFNAEEDLVSIRDANSDDDDDDDDDDEKGVSVSVDFDYELWIRSPKSVRERRGKFMKSMGMSLDGIVVENSLDFEKEEILERGKDISSSEEDFSSCRLSMSCCSSVSSSEEFDLVDNNLPFQDGNLEKGMRDNEKTSDCSNQLVIAKESEDCVNVSVVSPFQGLVDREFEDTDGDVVTRTINRARRGWLRRLRSMTCMVDNGTEEGSYAVSGCRLRKVKVRQCRKKMKELSSLYLRQDIQAHEGSILAMKFSPDGQYLATGGEDGVVRVWQVVEEERCNEIHIPEIDPSSIYFTVNKLSQLKPLFMDKEKLKNMRTTSDSACVVFPPKIFRLLEKPLREFHGHRSEVLDLSWSKKNYLLSSSVDKTVRLWQVNHDLCLKVFSHSNYVTCIQFNPVDDDYFISGSIDGKVRIWAISDCQVVDWTDVRDIVTAVCYRPDGQGGIVGSLAGNCRLYKISDNHLQLDSQLCLIGKNKKKLPGRGITSFQFFPEDSNKVMVTCADSQVRILDGNNVICKYKSLNTGSPMCASFTSDGKHILSACEDSNVYLWNVDQEESNPMKSKKIRSCERFSSNASVAVPWHGLKPQITENEQLNVMVKKSPQVAMQLHPNPPASFSLGQEFFLESFPKGSATWPEEKLPVSSSKTKKTSLIRNSEYKFLKSSCKSTNRTHAWGMVIVTAGWDGRIKSFQNYGLPIPV* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1759 706 ProSiteProfiles Trp-Asp (WD) repeats profile. 250 291 IPR001680 GO:0005515
Mal2g1759 706 Gene3D - 186 340 IPR015943 GO:0005515
Mal2g1759 706 CDD WD40 246 559 - -
Mal2g1759 706 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 7 705 - -
Mal2g1759 706 PANTHER WD REPEAT DOMAIN 44 7 705 IPR040324 -
Mal2g1759 706 SUPERFAMILY WD40 repeat-like 243 697 IPR036322 GO:0005515
Mal2g1759 706 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 250 283 - -
Mal2g1759 706 ProSiteProfiles Trp-Asp (WD) repeats profile. 391 423 IPR001680 GO:0005515
Mal2g1759 706 ProSiteProfiles Trp-Asp (WD) repeats profile. 538 568 IPR001680 GO:0005515
Mal2g1759 706 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 351 384 - -
Mal2g1759 706 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 391 423 - -
Mal2g1759 706 Pfam WD domain, G-beta repeat 388 423 IPR001680 GO:0005515
Mal2g1759 706 Pfam WD domain, G-beta repeat 251 281 IPR001680 GO:0005515
Mal2g1759 706 Pfam WD domain, G-beta repeat 346 381 IPR001680 GO:0005515
Mal2g1759 706 ProSitePatterns Trp-Asp (WD) repeats signature. 546 560 IPR019775 -
Mal2g1759 706 SMART WD40_4 385 424 IPR001680 GO:0005515
Mal2g1759 706 SMART WD40_4 344 382 IPR001680 GO:0005515
Mal2g1759 706 SMART WD40_4 426 465 IPR001680 GO:0005515
Mal2g1759 706 SMART WD40_4 519 559 IPR001680 GO:0005515
Mal2g1759 706 SMART WD40_4 480 518 IPR001680 GO:0005515
Mal2g1759 706 SMART WD40_4 243 282 IPR001680 GO:0005515
Mal2g1759 706 PRINTS G protein beta WD-40 repeat signature 269 283 IPR020472 -
Mal2g1759 706 PRINTS G protein beta WD-40 repeat signature 369 383 IPR020472 -
Mal2g1759 706 PRINTS G protein beta WD-40 repeat signature 411 425 IPR020472 -
Mal2g1759 706 Gene3D - 344 485 IPR015943 GO:0005515
Mal2g1759 706 ProSiteProfiles Trp-Asp (WD) repeats profile. 351 391 IPR001680 GO:0005515
Mal2g1759 706 Gene3D - 486 699 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1759 Mal-Chr2 21133989 21136937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1759 343 570 U-box Gene Family AT2G33340 25.410 6.93e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1759 - - cam:101493225 1070.84