Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1740 ATGTCGGATTCACCAGCAGCAGAATCGAAGTTTGTGCGTGATTTGATTTTATATGCGGCGAGCGCGGCATTCAGTTGCTTGGTATTGTACACCGGCATGTCATATCTCGACCCGAACCGTGGATCATCCAAGAAGGCTCTTGAGCATAAGAAAGCCATTGCAAATCGTCTTGGTCGCCCCCTCATTAAAACCAACCATTACGAGGATGTAATAGCTTGTGATGTTATAAATCCTGACCACATCGATGTGGAGTTCGACTCCATCGGGGGACTGGAAACTATTAAAGAAGCTTTGTTTGAGCTTGTTATTCTTCCCCTAAAGCGATCAGACTTGTTTTCGCATGGAAAACTCCTGGGACCTCAAAAGGGGGTCTTGTTATATGGACCCCCTGGCACTGGGAAAACCATGCTTGCCAAAGCTATTGCTAAAGAGTCTGGAGCAGCTTTCATTAATGTGAGGATGTCCAATCTGATGAGCATGTGGTTCGGGGATGCCTCAAAGCTCGTGTCTGCCATATTTAGCTTGGCTTATAAGCTTCAGCCTGCTATCATATTCATCGATGAGGTAGACTATTTTTTGGGTCAACGTCGTTCATCAGATCACGATGTTTTGTTAAACATGAAAACTGAGTTCATGGCTCTATGGGATGGGTTCAGCACCGACCAGAATGCCCGAGTTATGGTACTTGCAGCAACTAATCGCCCTTCAGAACTTGATGAAGCAATACTTCGGCGTTTTCCTCAAGCCTTTGAAGTTGGAATTCCAGGCCAGAGGGAGAGGGCTGAGATATTGAAGGTTATCTTAAAGGACGAGAGGGTTGAAGATAACATAGACTTCAGTTATATAGCTGGTTTATGCAAGGGTTACAGTGGTTCAGATCTATTTGATCTTTGCAAGAAGGCTGCATATTCTCCCATTAGAGAACTGCTGGGTGACGAGAAGAAAGGGAAACAATCTTGTGAACCTAGACCTTTGTCGCAGTTTGATTTGGAGAAGGCCATTTCCACTTCACGGACGAAGGATGCTGCAAGCGAATACGGTGTGTCATCATCAAGACGGACGTTTCCTGAGTAA 1074 0.4525 MSDSPAAESKFVRDLILYAASAAFSCLVLYTGMSYLDPNRGSSKKALEHKKAIANRLGRPLIKTNHYEDVIACDVINPDHIDVEFDSIGGLETIKEALFELVILPLKRSDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAAFINVRMSNLMSMWFGDASKLVSAIFSLAYKLQPAIIFIDEVDYFLGQRRSSDHDVLLNMKTEFMALWDGFSTDQNARVMVLAATNRPSELDEAILRRFPQAFEVGIPGQRERAEILKVILKDERVEDNIDFSYIAGLCKGYSGSDLFDLCKKAAYSPIRELLGDEKKGKQSCEPRPLSQFDLEKAISTSRTKDAASEYGVSSSRRTFPE* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1740 357 Gene3D - 82 339 IPR027417 -
Mal2g1740 357 CDD AAA 89 253 - -
Mal2g1740 357 Pfam AAA+ lid domain 276 309 IPR041569 -
Mal2g1740 357 ProSitePatterns AAA-protein family signature. 226 245 IPR003960 GO:0005524|GO:0016887
Mal2g1740 357 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-LIKE 6 342 - -
Mal2g1740 357 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 6 342 - -
Mal2g1740 357 SMART AAA_5 120 256 IPR003593 -
Mal2g1740 357 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 309 IPR027417 -
Mal2g1740 357 Pfam ATPase family associated with various cellular activities (AAA) 124 252 IPR003959 GO:0005524|GO:0016887
Mal2g1740 357 MobiDBLite consensus disorder prediction 336 357 - -
Mal2g1740 357 Gene3D - 255 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1740 Mal-Chr2 20882940 20889935 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1740 83 314 Calmodulin-binding Proteins AT3G56690 34.874 4.43e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1740 K22530 - gmx:100796908 567.77